Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm10925-201ENSMUST00000189941 678 ntBASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Gm43383-201ENSMUST00000195981 469 ntBASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
Vps53Q8CCB4 AC153899.1-201ENSMUST00000214092 1117 ntBASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Gm3800-201ENSMUST00000221086 554 ntBASIC7.39□□□□□ -1.23
Vps53Q8CCB4 AC105407.1-201ENSMUST00000225684 614 ntBASIC7.39□□□□□ -1.23
Vps53Q8CCB4 AC164597.1-201ENSMUST00000226538 514 ntBASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Gm24919-201ENSMUST00000083020 106 ntBASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
Vps53Q8CCB4 AC022775.1-201ENSMUST00000228163 2698 ntBASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Robo2-210ENSMUST00000226478 8059 ntBASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Gm18879-201ENSMUST00000221187 1537 ntBASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Gm38276-201ENSMUST00000192446 1343 ntBASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Gm14755-201ENSMUST00000118037 384 ntBASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Gm11987-201ENSMUST00000118524 381 ntBASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Gm14791-201ENSMUST00000119061 1166 ntBASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Gm26410-201ENSMUST00000157670 261 ntBASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Gm22701-201ENSMUST00000175371 291 ntBASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Gm27005-201ENSMUST00000182783 921 ntBASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Gm37135-201ENSMUST00000192652 534 ntBASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Gm38122-201ENSMUST00000192679 885 ntBASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Ighv1-10-201ENSMUST00000194372 355 ntBASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Gm44809-201ENSMUST00000208305 993 ntBASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Gm44554-201ENSMUST00000208738 147 ntBASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Gm7499-201ENSMUST00000210423 813 ntBASIC7.38□□□□□ -1.23
Vps53Q8CCB4 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC7.38□□□□□ -1.23
Vps53Q8CCB4 AC116591.1-201ENSMUST00000227919 351 ntBASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Dennd6a-204ENSMUST00000224248 2775 ntBASIC7.38□□□□□ -1.23
Vps53Q8CCB4 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC7.38□□□□□ -1.23
Vps53Q8CCB4 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 AC098728.1-202ENSMUST00000226656 2198 ntBASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm38257-201ENSMUST00000195881 2761 ntBASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm44046-201ENSMUST00000203145 2678 ntBASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Vps53Q8CCB4 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms