Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Gm23149-201ENSMUST00000158837 230 ntBASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Pea15b-201ENSMUST00000182806 387 ntBASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Mir8094-201ENSMUST00000183361 117 ntBASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Mir7084-201ENSMUST00000183876 70 ntBASIC8.12□□□□□ -1.11
Trim47Q8C0E3 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Gm38281-201ENSMUST00000192301 315 ntBASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Gm45432-201ENSMUST00000210391 416 ntBASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Gm46311-201ENSMUST00000217971 203 ntBASIC8.12□□□□□ -1.11
Trim47Q8C0E3 AC151901.1-201ENSMUST00000218274 180 ntBASIC8.12□□□□□ -1.11
Trim47Q8C0E3 AC120002.1-201ENSMUST00000218456 331 ntBASIC8.12□□□□□ -1.11
Trim47Q8C0E3 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Gm4808-201ENSMUST00000222283 1203 ntBASIC8.12□□□□□ -1.11
Trim47Q8C0E3 AC138604.2-201ENSMUST00000226620 921 ntBASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Gm9845-201ENSMUST00000056409 598 ntBASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Gm45528-201ENSMUST00000209854 3145 ntBASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Kcnmb2-203ENSMUST00000178668 2917 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Mov10l1-201ENSMUST00000015509 4052 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Golgb1-202ENSMUST00000039855 10847 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim47Q8C0E3 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim47Q8C0E3 CT025619.3-201ENSMUST00000216299 3267 ntBASIC8.11□□□□□ -1.11
Trim47Q8C0E3 AC107453.1-201ENSMUST00000227490 3268 ntBASIC8.11□□□□□ -1.11
Trim47Q8C0E3 AC125409.2-201ENSMUST00000221888 2158 ntBASIC8.11□□□□□ -1.11
Trim47Q8C0E3 AC164978.1-201ENSMUST00000228608 4011 ntBASIC8.11□□□□□ -1.11
Trim47Q8C0E3 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC8.11□□□□□ -1.11
Trim47Q8C0E3 AC154511.1-201ENSMUST00000222578 1587 ntBASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Gm25396-201ENSMUST00000103981 133 ntBASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Gm12386-201ENSMUST00000117380 688 ntBASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Gm11905-201ENSMUST00000117653 678 ntBASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Gm14887-201ENSMUST00000119522 663 ntBASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Amd-ps1-201ENSMUST00000120127 994 ntBASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Gm15538-201ENSMUST00000121410 313 ntBASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Gm11575-201ENSMUST00000122243 228 ntBASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Gm5272-201ENSMUST00000182730 982 ntBASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Gm7634-201ENSMUST00000185778 553 ntBASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Gm18185-201ENSMUST00000186725 667 ntBASIC8.11□□□□□ -1.11
Trim47Q8C0E3 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Gm7142-201ENSMUST00000194232 586 ntBASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Gm8539-201ENSMUST00000199822 501 ntBASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Gm45734-201ENSMUST00000211916 411 ntBASIC8.11□□□□□ -1.11
Trim47Q8C0E3 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC8.11□□□□□ -1.11
Trim47Q8C0E3 AC124778.1-201ENSMUST00000216013 162 ntBASIC8.11□□□□□ -1.11
Trim47Q8C0E3 AC153153.2-201ENSMUST00000223572 411 ntBASIC8.11□□□□□ -1.11
Trim47Q8C0E3 AC124489.2-201ENSMUST00000223930 589 ntBASIC8.11□□□□□ -1.11
Trim47Q8C0E3 CT573085.1-201ENSMUST00000224279 1197 ntBASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Gm25410-201ENSMUST00000083758 137 ntBASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Mir455-201ENSMUST00000093594 82 ntBASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Parp11-201ENSMUST00000039680 3746 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Gm14367-201ENSMUST00000119214 1497 ntBASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim47Q8C0E3 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms