Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trub1Q8C0D0 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trub1Q8C0D0 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trub1Q8C0D0 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trub1Q8C0D0 Gm45413-201ENSMUST00000210389 3538 ntBASIC6.27□□□□□ -1.41
Trub1Q8C0D0 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trub1Q8C0D0 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trub1Q8C0D0 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC6.27□□□□□ -1.41
Trub1Q8C0D0 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Trub1Q8C0D0 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trub1Q8C0D0 Fam26d-202ENSMUST00000218239 3075 ntBASIC6.27□□□□□ -1.41
Trub1Q8C0D0 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trub1Q8C0D0 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC6.26□□□□□ -1.41
Trub1Q8C0D0 Gm20775-201ENSMUST00000100115 1851 ntBASIC6.26□□□□□ -1.41
Trub1Q8C0D0 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
Trub1Q8C0D0 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trub1Q8C0D0 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Trub1Q8C0D0 n-R5s178-201ENSMUST00000104249 114 ntBASIC6.26□□□□□ -1.41
Trub1Q8C0D0 Snora35-201ENSMUST00000104579 128 ntBASIC6.26□□□□□ -1.41
Trub1Q8C0D0 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC6.26□□□□□ -1.41
Trub1Q8C0D0 Gm12653-201ENSMUST00000117778 561 ntBASIC6.26□□□□□ -1.41
Trub1Q8C0D0 Gm4234-201ENSMUST00000119747 714 ntBASIC6.26□□□□□ -1.41
Trub1Q8C0D0 Gm12308-201ENSMUST00000120440 389 ntBASIC6.26□□□□□ -1.41
Trub1Q8C0D0 Gm15596-201ENSMUST00000121139 784 ntBASIC6.26□□□□□ -1.41
Trub1Q8C0D0 Gm12451-201ENSMUST00000121636 633 ntBASIC6.26□□□□□ -1.41
Trub1Q8C0D0 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC6.26□□□□□ -1.41
Trub1Q8C0D0 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Trub1Q8C0D0 Gm29234-201ENSMUST00000187452 1262 ntBASIC6.26□□□□□ -1.41
Trub1Q8C0D0 Gm28973-201ENSMUST00000189310 613 ntBASIC6.26□□□□□ -1.41
Trub1Q8C0D0 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC6.26□□□□□ -1.41
Trub1Q8C0D0 Gm5694-201ENSMUST00000195648 641 ntBASIC6.26□□□□□ -1.41
Trub1Q8C0D0 Gm5886-202ENSMUST00000203957 522 ntBASIC6.26□□□□□ -1.41
Trub1Q8C0D0 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC6.26□□□□□ -1.41
Trub1Q8C0D0 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC6.26□□□□□ -1.41
Trub1Q8C0D0 Gm3266-201ENSMUST00000217832 591 ntBASIC6.26□□□□□ -1.41
Trub1Q8C0D0 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC6.26□□□□□ -1.41
Trub1Q8C0D0 Gm9292-201ENSMUST00000222008 710 ntBASIC6.26□□□□□ -1.41
Trub1Q8C0D0 AC113269.1-201ENSMUST00000227185 674 ntBASIC6.26□□□□□ -1.41
Trub1Q8C0D0 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trub1Q8C0D0 Kcne3-201ENSMUST00000049333 1012 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trub1Q8C0D0 Gm8412-201ENSMUST00000077493 440 ntBASIC6.26□□□□□ -1.41
Trub1Q8C0D0 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC6.26□□□□□ -1.41
Trub1Q8C0D0 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Trub1Q8C0D0 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Trub1Q8C0D0 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trub1Q8C0D0 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
Trub1Q8C0D0 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
Trub1Q8C0D0 Gm5832-201ENSMUST00000121704 1582 ntBASIC6.26□□□□□ -1.41
Trub1Q8C0D0 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Trub1Q8C0D0 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Trub1Q8C0D0 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.25□□□□□ -1.41
Trub1Q8C0D0 Gm18880-201ENSMUST00000223333 1541 ntBASIC6.25□□□□□ -1.41
Trub1Q8C0D0 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Trub1Q8C0D0 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Trub1Q8C0D0 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trub1Q8C0D0 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trub1Q8C0D0 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trub1Q8C0D0 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trub1Q8C0D0 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Trub1Q8C0D0 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trub1Q8C0D0 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC6.25□□□□□ -1.41
Trub1Q8C0D0 Gm12643-201ENSMUST00000116078 374 ntBASIC6.25□□□□□ -1.41
Trub1Q8C0D0 Gm12713-201ENSMUST00000118404 764 ntBASIC6.25□□□□□ -1.41
Trub1Q8C0D0 Gm7700-201ENSMUST00000120273 970 ntBASIC6.25□□□□□ -1.41
Trub1Q8C0D0 Gm13998-201ENSMUST00000120952 335 ntBASIC6.25□□□□□ -1.41
Trub1Q8C0D0 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Trub1Q8C0D0 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Trub1Q8C0D0 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC6.25□□□□□ -1.41
Trub1Q8C0D0 Gm22428-201ENSMUST00000158554 132 ntBASIC6.25□□□□□ -1.41
Trub1Q8C0D0 Gm27348-201ENSMUST00000184511 170 ntBASIC6.25□□□□□ -1.41
Trub1Q8C0D0 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC6.25□□□□□ -1.41
Trub1Q8C0D0 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Trub1Q8C0D0 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC6.25□□□□□ -1.41
Trub1Q8C0D0 Gm44374-201ENSMUST00000199821 140 ntBASIC6.25□□□□□ -1.41
Trub1Q8C0D0 Gm43233-201ENSMUST00000200491 616 ntBASIC6.25□□□□□ -1.41
Trub1Q8C0D0 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC6.25□□□□□ -1.41
Trub1Q8C0D0 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC6.25□□□□□ -1.41
Trub1Q8C0D0 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC6.25□□□□□ -1.41
Trub1Q8C0D0 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC6.25□□□□□ -1.41
Trub1Q8C0D0 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Trub1Q8C0D0 Gm18405-201ENSMUST00000220743 511 ntBASIC6.25□□□□□ -1.41
Trub1Q8C0D0 AC154219.1-201ENSMUST00000220764 1262 ntBASIC6.25□□□□□ -1.41
Trub1Q8C0D0 AC159208.1-201ENSMUST00000221403 649 ntBASIC6.25□□□□□ -1.41
Trub1Q8C0D0 Gm10095-201ENSMUST00000222765 483 ntBASIC6.25□□□□□ -1.41
Trub1Q8C0D0 AC164302.1-201ENSMUST00000227036 433 ntBASIC6.25□□□□□ -1.41
Trub1Q8C0D0 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Trub1Q8C0D0 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Trub1Q8C0D0 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trub1Q8C0D0 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Trub1Q8C0D0 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC6.25□□□□□ -1.41
Trub1Q8C0D0 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trub1Q8C0D0 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.25□□□□□ -1.41
Trub1Q8C0D0 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trub1Q8C0D0 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trub1Q8C0D0 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Trub1Q8C0D0 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Gm37435-201ENSMUST00000192078 3947 ntBASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
Trub1Q8C0D0 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms