Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm10860-201ENSMUST00000176934 1888 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usp40Q8BWR4 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Usp40Q8BWR4 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Usp40Q8BWR4 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC8.62□□□□□ -1.03
Usp40Q8BWR4 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Usp40Q8BWR4 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC8.62□□□□□ -1.03
Usp40Q8BWR4 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Usp40Q8BWR4 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Usp40Q8BWR4 Gm44562-201ENSMUST00000207194 1347 ntBASIC8.62□□□□□ -1.03
Usp40Q8BWR4 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC8.62□□□□□ -1.03
Usp40Q8BWR4 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC8.62□□□□□ -1.03
Usp40Q8BWR4 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Usp40Q8BWR4 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC8.62□□□□□ -1.03
Usp40Q8BWR4 Gm11848-201ENSMUST00000121207 973 ntBASIC8.62□□□□□ -1.03
Usp40Q8BWR4 n-R5s19-201ENSMUST00000122793 120 ntBASIC8.62□□□□□ -1.03
Usp40Q8BWR4 Gm24395-201ENSMUST00000158139 125 ntBASIC8.62□□□□□ -1.03
Usp40Q8BWR4 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC8.62□□□□□ -1.03
Usp40Q8BWR4 Gm7713-201ENSMUST00000181201 1007 ntBASIC8.62□□□□□ -1.03
Usp40Q8BWR4 Gm20574-201ENSMUST00000182867 917 ntBASIC8.62□□□□□ -1.03
Usp40Q8BWR4 Gm28064-201ENSMUST00000185639 858 ntBASIC8.62□□□□□ -1.03
Usp40Q8BWR4 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Usp40Q8BWR4 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC8.62□□□□□ -1.03
Usp40Q8BWR4 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Usp40Q8BWR4 Gm6290-201ENSMUST00000207666 1158 ntBASIC8.62□□□□□ -1.03
Usp40Q8BWR4 Gm45514-201ENSMUST00000211531 689 ntBASIC8.62□□□□□ -1.03
Usp40Q8BWR4 CT485607.3-201ENSMUST00000213361 672 ntBASIC8.62□□□□□ -1.03
Usp40Q8BWR4 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC8.62□□□□□ -1.03
Usp40Q8BWR4 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC8.62□□□□□ -1.03
Usp40Q8BWR4 Gm18329-201ENSMUST00000215832 589 ntBASIC8.62□□□□□ -1.03
Usp40Q8BWR4 AC147101.1-201ENSMUST00000217964 312 ntBASIC8.62□□□□□ -1.03
Usp40Q8BWR4 Gm2614-201ENSMUST00000223227 403 ntBASIC8.62□□□□□ -1.03
Usp40Q8BWR4 AC125464.1-201ENSMUST00000228013 512 ntBASIC8.62□□□□□ -1.03
Usp40Q8BWR4 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC8.62□□□□□ -1.03
Usp40Q8BWR4 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Usp40Q8BWR4 Gm9521-201ENSMUST00000206656 1516 ntBASIC8.62□□□□□ -1.03
Usp40Q8BWR4 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC8.62□□□□□ -1.03
Usp40Q8BWR4 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Usp40Q8BWR4 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Usp40Q8BWR4 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC8.62□□□□□ -1.03
Usp40Q8BWR4 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC8.62□□□□□ -1.03
Usp40Q8BWR4 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Usp40Q8BWR4 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Usp40Q8BWR4 Gm14802-201ENSMUST00000121944 1885 ntBASIC8.62□□□□□ -1.03
Usp40Q8BWR4 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm43190-201ENSMUST00000187850 1779 ntBASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm38368-201ENSMUST00000193181 1335 ntBASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm13428-201ENSMUST00000117540 365 ntBASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm11972-201ENSMUST00000118514 389 ntBASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm25971-201ENSMUST00000158953 286 ntBASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Mir5110-201ENSMUST00000175537 87 ntBASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm2539-203ENSMUST00000181352 746 ntBASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm37758-201ENSMUST00000194275 629 ntBASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 AC153357.1-201ENSMUST00000219190 482 ntBASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm19195-201ENSMUST00000222018 511 ntBASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Mir298-201ENSMUST00000083476 82 ntBASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC8.61□□□□□ -1.03
Usp40Q8BWR4 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC8.61□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms