Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm19196-201ENSMUST00000209258 357 ntBASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Gm8607-201ENSMUST00000221864 431 ntBASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 AC154481.1-201ENSMUST00000223532 331 ntBASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 AC107663.1-201ENSMUST00000224257 468 ntBASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 AC158750.1-201ENSMUST00000226163 634 ntBASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 AC113125.2-201ENSMUST00000226837 362 ntBASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 AC123658.1-201ENSMUST00000228364 867 ntBASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Gm14896-201ENSMUST00000121311 1351 ntBASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Gm9575-201ENSMUST00000122140 1339 ntBASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Gm11290-204ENSMUST00000224688 3042 ntBASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Gm43328-201ENSMUST00000198544 1434 ntBASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Gm5793-201ENSMUST00000119393 630 ntBASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Gm25487-201ENSMUST00000158725 125 ntBASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Gm42963-201ENSMUST00000202943 1217 ntBASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Gm44582-201ENSMUST00000209125 445 ntBASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Gm19340-201ENSMUST00000221995 345 ntBASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 AC105950.1-201ENSMUST00000222637 408 ntBASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 AC122937.2-201ENSMUST00000228258 1051 ntBASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Gm15732-201ENSMUST00000079794 480 ntBASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 CT030159.1-201ENSMUST00000221580 2261 ntBASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 BC055308-201ENSMUST00000193380 2538 ntBASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Gm14895-201ENSMUST00000121858 1361 ntBASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
Ccdc40Q8BI79 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
Ccdc40Q8BI79 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Gm37186-201ENSMUST00000195629 2861 ntBASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Gm19368-201ENSMUST00000221258 4424 ntBASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms