Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm37991-201ENSMUST00000194297 696 ntBASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Gm32158-201ENSMUST00000200135 404 ntBASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Gm8863-201ENSMUST00000216630 926 ntBASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 AC104906.1-201ENSMUST00000218122 913 ntBASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 AC140930.1-201ENSMUST00000221889 389 ntBASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 CT010453.2-201ENSMUST00000227005 483 ntBASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 AC154841.1-201ENSMUST00000227263 1479 ntBASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 AC113031.7-201ENSMUST00000228609 1928 ntBASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 AC154612.1-202ENSMUST00000224806 1725 ntBASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 Gm13338-201ENSMUST00000120235 361 ntBASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 Gm11879-201ENSMUST00000121885 702 ntBASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 Gm23553-201ENSMUST00000157817 295 ntBASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 Gm27158-201ENSMUST00000183813 238 ntBASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 Gm18839-201ENSMUST00000204292 670 ntBASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 Gm9292-201ENSMUST00000222008 710 ntBASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 AC154795.1-201ENSMUST00000225611 364 ntBASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 Gm22581-201ENSMUST00000083735 136 ntBASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Upf3bQ3ULL6 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 AC166358.5-201ENSMUST00000220706 1302 ntBASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Gm25795-201ENSMUST00000104421 132 ntBASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Gm7658-201ENSMUST00000119064 1124 ntBASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Gm12307-201ENSMUST00000120581 590 ntBASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Gm12140-201ENSMUST00000121214 544 ntBASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Gm6918-201ENSMUST00000167622 1222 ntBASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Gm29551-201ENSMUST00000190913 698 ntBASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Ighv5-3-201ENSMUST00000195336 322 ntBASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Gm43390-201ENSMUST00000196614 421 ntBASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 CT009556.1-201ENSMUST00000227282 449 ntBASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms