Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
H3f3aP84244 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC5.51□□□□□ -1.53
H3f3aP84244 Gm10062-201ENSMUST00000072180 1470 ntBASIC5.51□□□□□ -1.53
H3f3aP84244 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
H3f3aP84244 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC5.5□□□□□ -1.53
H3f3aP84244 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC5.5□□□□□ -1.53
H3f3aP84244 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
H3f3aP84244 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
H3f3aP84244 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
H3f3aP84244 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
H3f3aP84244 AC156025.2-201ENSMUST00000225907 1533 ntBASIC5.5□□□□□ -1.53
H3f3aP84244 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
H3f3aP84244 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
H3f3aP84244 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
H3f3aP84244 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
H3f3aP84244 Gm10936-201ENSMUST00000105264 252 ntBASIC5.5□□□□□ -1.53
H3f3aP84244 Gm22714-201ENSMUST00000116894 78 ntBASIC5.5□□□□□ -1.53
H3f3aP84244 Gm15332-201ENSMUST00000118386 357 ntBASIC5.5□□□□□ -1.53
H3f3aP84244 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC5.5□□□□□ -1.53
H3f3aP84244 Gm11879-201ENSMUST00000121885 702 ntBASIC5.5□□□□□ -1.53
H3f3aP84244 Gm11341-201ENSMUST00000122316 447 ntBASIC5.5□□□□□ -1.53
H3f3aP84244 Gm12152-201ENSMUST00000122465 684 ntBASIC5.5□□□□□ -1.53
H3f3aP84244 Gm5125-201ENSMUST00000148614 624 ntBASIC5.5□□□□□ -1.53
H3f3aP84244 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC5.5□□□□□ -1.53
H3f3aP84244 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC5.5□□□□□ -1.53
H3f3aP84244 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC5.5□□□□□ -1.53
H3f3aP84244 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC5.5□□□□□ -1.53
H3f3aP84244 Gm29663-201ENSMUST00000186962 853 ntBASIC5.5□□□□□ -1.53
H3f3aP84244 Gm43233-201ENSMUST00000200491 616 ntBASIC5.5□□□□□ -1.53
H3f3aP84244 Gm18290-201ENSMUST00000202900 844 ntBASIC5.5□□□□□ -1.53
H3f3aP84244 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC5.5□□□□□ -1.53
H3f3aP84244 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC5.5□□□□□ -1.53
H3f3aP84244 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC5.5□□□□□ -1.53
H3f3aP84244 AC151904.3-201ENSMUST00000219266 895 ntBASIC5.5□□□□□ -1.53
H3f3aP84244 AC154904.1-201ENSMUST00000219510 312 ntBASIC5.5□□□□□ -1.53
H3f3aP84244 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC5.5□□□□□ -1.53
H3f3aP84244 AC140930.1-201ENSMUST00000221889 389 ntBASIC5.5□□□□□ -1.53
H3f3aP84244 Gm2614-201ENSMUST00000223227 403 ntBASIC5.5□□□□□ -1.53
H3f3aP84244 AC129537.1-201ENSMUST00000226596 1228 ntBASIC5.5□□□□□ -1.53
H3f3aP84244 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
H3f3aP84244 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
H3f3aP84244 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
H3f3aP84244 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
H3f3aP84244 Gm42611-201ENSMUST00000199446 3407 ntBASIC5.5□□□□□ -1.53
H3f3aP84244 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC5.5□□□□□ -1.53
H3f3aP84244 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
H3f3aP84244 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
H3f3aP84244 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC5.5□□□□□ -1.53
H3f3aP84244 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
H3f3aP84244 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
H3f3aP84244 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
H3f3aP84244 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
H3f3aP84244 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
H3f3aP84244 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
H3f3aP84244 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
H3f3aP84244 Gm37106-201ENSMUST00000193760 1532 ntBASIC5.49□□□□□ -1.53
H3f3aP84244 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
H3f3aP84244 Gm43330-201ENSMUST00000199706 2153 ntBASIC5.49□□□□□ -1.53
H3f3aP84244 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
H3f3aP84244 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
H3f3aP84244 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
H3f3aP84244 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
H3f3aP84244 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
H3f3aP84244 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
H3f3aP84244 Gm13811-201ENSMUST00000117800 256 ntBASIC5.49□□□□□ -1.53
H3f3aP84244 Gm13469-201ENSMUST00000118231 350 ntBASIC5.49□□□□□ -1.53
H3f3aP84244 Gm14098-201ENSMUST00000119295 623 ntBASIC5.49□□□□□ -1.53
H3f3aP84244 Gm14375-201ENSMUST00000119490 855 ntBASIC5.49□□□□□ -1.53
H3f3aP84244 Gm12654-201ENSMUST00000120387 587 ntBASIC5.49□□□□□ -1.53
H3f3aP84244 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
H3f3aP84244 Gm12396-201ENSMUST00000121600 306 ntBASIC5.49□□□□□ -1.53
H3f3aP84244 Gm12094-201ENSMUST00000121781 472 ntBASIC5.49□□□□□ -1.53
H3f3aP84244 Gm15187-201ENSMUST00000122329 264 ntBASIC5.49□□□□□ -1.53
H3f3aP84244 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC5.49□□□□□ -1.53
H3f3aP84244 Gm16102-201ENSMUST00000160955 420 ntBASIC5.49□□□□□ -1.53
H3f3aP84244 Gm6541-201ENSMUST00000165542 561 ntBASIC5.49□□□□□ -1.53
H3f3aP84244 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
H3f3aP84244 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC5.49□□□□□ -1.53
H3f3aP84244 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC5.49□□□□□ -1.53
H3f3aP84244 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC5.49□□□□□ -1.53
H3f3aP84244 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
H3f3aP84244 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC5.49□□□□□ -1.53
H3f3aP84244 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
H3f3aP84244 Gm29234-201ENSMUST00000187452 1262 ntBASIC5.49□□□□□ -1.53
H3f3aP84244 Gm29551-201ENSMUST00000190913 698 ntBASIC5.49□□□□□ -1.53
H3f3aP84244 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
H3f3aP84244 Gm37838-201ENSMUST00000194464 312 ntBASIC5.49□□□□□ -1.53
H3f3aP84244 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
H3f3aP84244 Gm32158-201ENSMUST00000200135 404 ntBASIC5.49□□□□□ -1.53
H3f3aP84244 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC5.49□□□□□ -1.53
H3f3aP84244 Gm5318-201ENSMUST00000205249 406 ntBASIC5.49□□□□□ -1.53
H3f3aP84244 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
H3f3aP84244 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
H3f3aP84244 AC154219.1-201ENSMUST00000220764 1262 ntBASIC5.49□□□□□ -1.53
H3f3aP84244 AC154634.2-201ENSMUST00000225983 1184 ntBASIC5.49□□□□□ -1.53
H3f3aP84244 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
H3f3aP84244 Gm22581-201ENSMUST00000083735 136 ntBASIC5.49□□□□□ -1.53
H3f3aP84244 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
H3f3aP84244 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
H3f3aP84244 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms