Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm14349-201ENSMUST00000137155 902 ntBASIC9.38□□□□□ -0.91
Cux1P53564 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Cux1P53564 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Cux1P53564 Gm25489-201ENSMUST00000158727 141 ntBASIC9.38□□□□□ -0.91
Cux1P53564 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC9.38□□□□□ -0.91
Cux1P53564 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Cux1P53564 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC9.38□□□□□ -0.91
Cux1P53564 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC9.38□□□□□ -0.91
Cux1P53564 Gm42440-201ENSMUST00000197906 2284 ntBASIC9.38□□□□□ -0.91
Cux1P53564 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC9.38□□□□□ -0.91
Cux1P53564 Gm45117-201ENSMUST00000207250 1774 ntBASIC9.38□□□□□ -0.91
Cux1P53564 AC124445.1-201ENSMUST00000218613 452 ntBASIC9.38□□□□□ -0.91
Cux1P53564 AC153937.1-201ENSMUST00000218734 412 ntBASIC9.38□□□□□ -0.91
Cux1P53564 Gm5087-204ENSMUST00000225820 645 ntBASIC9.38□□□□□ -0.91
Cux1P53564 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC9.38□□□□□ -0.91
Cux1P53564 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Cux1P53564 Gm25682-201ENSMUST00000083942 164 ntBASIC9.38□□□□□ -0.91
Cux1P53564 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Cux1P53564 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Cux1P53564 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Cux1P53564 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cux1P53564 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC9.38□□□□□ -0.91
Cux1P53564 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Cux1P53564 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cux1P53564 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cux1P53564 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC9.37□□□□□ -0.91
Cux1P53564 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Cux1P53564 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cux1P53564 Gm43769-201ENSMUST00000201871 4323 ntBASIC9.37□□□□□ -0.91
Cux1P53564 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cux1P53564 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cux1P53564 AC152922.2-201ENSMUST00000213353 3879 ntBASIC9.37□□□□□ -0.91
Cux1P53564 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC9.37□□□□□ -0.91
Cux1P53564 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC9.37□□□□□ -0.91
Cux1P53564 Gm22895-201ENSMUST00000157508 308 ntBASIC9.37□□□□□ -0.91
Cux1P53564 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC9.37□□□□□ -0.91
Cux1P53564 Gm36999-201ENSMUST00000192756 1046 ntBASIC9.37□□□□□ -0.91
Cux1P53564 CU062626.1-201ENSMUST00000225248 505 ntBASIC9.37□□□□□ -0.91
Cux1P53564 n-R5s46-201ENSMUST00000083960 116 ntBASIC9.37□□□□□ -0.91
Cux1P53564 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Cux1P53564 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Cux1P53564 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cux1P53564 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC9.37□□□□□ -0.91
Cux1P53564 AC159635.1-201ENSMUST00000220905 2102 ntBASIC9.37□□□□□ -0.91
Cux1P53564 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Cux1P53564 Gm36936-201ENSMUST00000194508 2749 ntBASIC9.37□□□□□ -0.91
Cux1P53564 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cux1P53564 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Cux1P53564 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cux1P53564 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cux1P53564 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cux1P53564 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Cux1P53564 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cux1P53564 Gm16205-201ENSMUST00000117720 1027 ntBASIC9.36□□□□□ -0.91
Cux1P53564 Gm8545-201ENSMUST00000120692 801 ntBASIC9.36□□□□□ -0.91
Cux1P53564 Gm12936-201ENSMUST00000121439 301 ntBASIC9.36□□□□□ -0.91
Cux1P53564 Gm5809-201ENSMUST00000121854 529 ntBASIC9.36□□□□□ -0.91
Cux1P53564 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC9.36□□□□□ -0.91
Cux1P53564 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC9.36□□□□□ -0.91
Cux1P53564 Mir3110-201ENSMUST00000175053 80 ntBASIC9.36□□□□□ -0.91
Cux1P53564 Vis1-201ENSMUST00000183957 201 ntBASIC9.36□□□□□ -0.91
Cux1P53564 Mir6986-201ENSMUST00000184483 58 ntBASIC9.36□□□□□ -0.91
Cux1P53564 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC9.36□□□□□ -0.91
Cux1P53564 Gm8920-201ENSMUST00000196153 924 ntBASIC9.36□□□□□ -0.91
Cux1P53564 Api5-ps-201ENSMUST00000206607 577 ntBASIC9.36□□□□□ -0.91
Cux1P53564 Gm8523-201ENSMUST00000211386 552 ntBASIC9.36□□□□□ -0.91
Cux1P53564 CT010431.1-201ENSMUST00000221249 1080 ntBASIC9.36□□□□□ -0.91
Cux1P53564 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cux1P53564 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cux1P53564 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cux1P53564 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
Cux1P53564 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC9.36□□□□□ -0.91
Cux1P53564 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC9.36□□□□□ -0.91
Cux1P53564 Chd8-201ENSMUST00000089752 8190 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cux1P53564 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cux1P53564 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Cux1P53564 Apbb2-204ENSMUST00000159786 6333 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Cux1P53564 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC9.36□□□□□ -0.91
Cux1P53564 Gm43031-201ENSMUST00000198500 1887 ntBASIC9.36□□□□□ -0.91
Cux1P53564 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cux1P53564 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC9.36□□□□□ -0.91
Cux1P53564 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cux1P53564 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Cux1P53564 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cux1P53564 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Cux1P53564 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Cux1P53564 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Cux1P53564 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC9.36□□□□□ -0.91
Cux1P53564 Gm12115-201ENSMUST00000119969 447 ntBASIC9.36□□□□□ -0.91
Cux1P53564 Gm8185-201ENSMUST00000160999 669 ntBASIC9.36□□□□□ -0.91
Cux1P53564 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Cux1P53564 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Cux1P53564 Gm7335-201ENSMUST00000172475 373 ntBASIC9.36□□□□□ -0.91
Cux1P53564 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cux1P53564 Gm18969-201ENSMUST00000189423 730 ntBASIC9.36□□□□□ -0.91
Cux1P53564 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC9.36□□□□□ -0.91
Cux1P53564 Gm32158-201ENSMUST00000200135 404 ntBASIC9.36□□□□□ -0.91
Cux1P53564 Gm5418-201ENSMUST00000206932 528 ntBASIC9.36□□□□□ -0.91
Cux1P53564 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC9.36□□□□□ -0.91
Cux1P53564 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms