Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm42443-201ENSMUST00000198084 1155 ntBASIC5.14□□□□□ -1.59
Nkx2-1P50220 Gm44383-201ENSMUST00000198940 129 ntBASIC5.14□□□□□ -1.59
Nkx2-1P50220 Igkv4-77-201ENSMUST00000199410 352 ntBASIC5.14□□□□□ -1.59
Nkx2-1P50220 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC5.14□□□□□ -1.59
Nkx2-1P50220 Gm7452-201ENSMUST00000200764 788 ntBASIC5.14□□□□□ -1.59
Nkx2-1P50220 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC5.14□□□□□ -1.59
Nkx2-1P50220 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Nkx2-1P50220 Gm44112-201ENSMUST00000204787 372 ntBASIC5.14□□□□□ -1.59
Nkx2-1P50220 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC5.14□□□□□ -1.59
Nkx2-1P50220 AC153847.1-201ENSMUST00000214524 353 ntBASIC5.14□□□□□ -1.59
Nkx2-1P50220 Gm18863-201ENSMUST00000217004 1299 ntBASIC5.14□□□□□ -1.59
Nkx2-1P50220 Gm3213-201ENSMUST00000219296 441 ntBASIC5.14□□□□□ -1.59
Nkx2-1P50220 AC154481.1-201ENSMUST00000223532 331 ntBASIC5.14□□□□□ -1.59
Nkx2-1P50220 CT009495.1-201ENSMUST00000224221 862 ntBASIC5.14□□□□□ -1.59
Nkx2-1P50220 CT030705.2-201ENSMUST00000225301 556 ntBASIC5.14□□□□□ -1.59
Nkx2-1P50220 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Nkx2-1P50220 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Nkx2-1P50220 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Nkx2-1P50220 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC5.14□□□□□ -1.59
Nkx2-1P50220 Mir412-201ENSMUST00000083636 80 ntBASIC5.14□□□□□ -1.59
Nkx2-1P50220 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC5.14□□□□□ -1.59
Nkx2-1P50220 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Nkx2-1P50220 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Nkx2-1P50220 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Nkx2-1P50220 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Nkx2-1P50220 Gm37864-201ENSMUST00000195308 3075 ntBASIC5.14□□□□□ -1.59
Nkx2-1P50220 Gm38325-201ENSMUST00000194507 1377 ntBASIC5.14□□□□□ -1.59
Nkx2-1P50220 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Nkx2-1P50220 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Nkx2-1P50220 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Nkx2-1P50220 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Nkx2-1P50220 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Nkx2-1P50220 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Nkx2-1P50220 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Nkx2-1P50220 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Nkx2-1P50220 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Nkx2-1P50220 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
Nkx2-1P50220 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Nkx2-1P50220 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Nkx2-1P50220 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC5.13□□□□□ -1.59
Nkx2-1P50220 AC154755.2-201ENSMUST00000224384 2857 ntBASIC5.13□□□□□ -1.59
Nkx2-1P50220 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Nkx2-1P50220 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC5.13□□□□□ -1.59
Nkx2-1P50220 Gm25415-201ENSMUST00000104220 132 ntBASIC5.13□□□□□ -1.59
Nkx2-1P50220 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Nkx2-1P50220 Snord88a-201ENSMUST00000116723 90 ntBASIC5.13□□□□□ -1.59
Nkx2-1P50220 Gm13141-201ENSMUST00000117417 456 ntBASIC5.13□□□□□ -1.59
Nkx2-1P50220 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC5.13□□□□□ -1.59
Nkx2-1P50220 Gm7599-201ENSMUST00000121453 796 ntBASIC5.13□□□□□ -1.59
Nkx2-1P50220 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC5.13□□□□□ -1.59
Nkx2-1P50220 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC5.13□□□□□ -1.59
Nkx2-1P50220 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC5.13□□□□□ -1.59
Nkx2-1P50220 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC5.13□□□□□ -1.59
Nkx2-1P50220 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Nkx2-1P50220 Gm24545-201ENSMUST00000158651 85 ntBASIC5.13□□□□□ -1.59
Nkx2-1P50220 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Nkx2-1P50220 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Nkx2-1P50220 Gm3242-201ENSMUST00000171273 485 ntBASIC5.13□□□□□ -1.59
Nkx2-1P50220 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC5.13□□□□□ -1.59
Nkx2-1P50220 Gm23632-201ENSMUST00000175289 125 ntBASIC5.13□□□□□ -1.59
Nkx2-1P50220 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC5.13□□□□□ -1.59
Nkx2-1P50220 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC5.13□□□□□ -1.59
Nkx2-1P50220 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Nkx2-1P50220 Gm5345-201ENSMUST00000183076 1014 ntBASIC5.13□□□□□ -1.59
Nkx2-1P50220 Gm27360-201ENSMUST00000183487 80 ntBASIC5.13□□□□□ -1.59
Nkx2-1P50220 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC5.13□□□□□ -1.59
Nkx2-1P50220 Mir7033-201ENSMUST00000184259 81 ntBASIC5.13□□□□□ -1.59
Nkx2-1P50220 Mir6362-201ENSMUST00000184329 107 ntBASIC5.13□□□□□ -1.59
Nkx2-1P50220 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC5.13□□□□□ -1.59
Nkx2-1P50220 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC5.13□□□□□ -1.59
Nkx2-1P50220 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Nkx2-1P50220 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Nkx2-1P50220 Gm2398-201ENSMUST00000218347 883 ntBASIC5.13□□□□□ -1.59
Nkx2-1P50220 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC5.13□□□□□ -1.59
Nkx2-1P50220 AC167222.2-201ENSMUST00000220014 295 ntBASIC5.13□□□□□ -1.59
Nkx2-1P50220 AC122371.2-201ENSMUST00000220583 366 ntBASIC5.13□□□□□ -1.59
Nkx2-1P50220 AC170086.2-201ENSMUST00000224733 803 ntBASIC5.13□□□□□ -1.59
Nkx2-1P50220 AC154838.2-201ENSMUST00000226602 747 ntBASIC5.13□□□□□ -1.59
Nkx2-1P50220 AC154806.1-203ENSMUST00000227370 1032 ntBASIC5.13□□□□□ -1.59
Nkx2-1P50220 Olfr192-201ENSMUST00000080251 925 ntBASIC5.13□□□□□ -1.59
Nkx2-1P50220 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Nkx2-1P50220 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Nkx2-1P50220 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.13□□□□□ -1.59
Nkx2-1P50220 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Nkx2-1P50220 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Nkx2-1P50220 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC5.13□□□□□ -1.59
Nkx2-1P50220 Gm13712-201ENSMUST00000117484 2295 ntBASIC5.13□□□□□ -1.59
Nkx2-1P50220 AC159196.3-201ENSMUST00000224307 1841 ntBASIC5.13□□□□□ -1.59
Nkx2-1P50220 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Nkx2-1P50220 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Nkx2-1P50220 Gm37504-201ENSMUST00000192537 2374 ntBASIC5.13□□□□□ -1.59
Nkx2-1P50220 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC5.13□□□□□ -1.59
Nkx2-1P50220 AC155167.2-201ENSMUST00000226127 1945 ntBASIC5.13□□□□□ -1.59
Nkx2-1P50220 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Nkx2-1P50220 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC5.13□□□□□ -1.59
Nkx2-1P50220 Gm44895-201ENSMUST00000206670 1538 ntBASIC5.13□□□□□ -1.59
Nkx2-1P50220 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Nkx2-1P50220 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Nkx2-1P50220 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC5.12□□□□□ -1.59
Nkx2-1P50220 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms