Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 AC134439.2-201ENSMUST00000221950 467 ntBASIC5.79□□□□□ -1.48
Sox6P40645 AC154861.1-201ENSMUST00000223767 800 ntBASIC5.79□□□□□ -1.48
Sox6P40645 AC105324.1-201ENSMUST00000227844 386 ntBASIC5.79□□□□□ -1.48
Sox6P40645 AC123665.3-201ENSMUST00000228735 1216 ntBASIC5.79□□□□□ -1.48
Sox6P40645 Gm9788-201ENSMUST00000057038 906 ntBASIC5.79□□□□□ -1.48
Sox6P40645 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Sox6P40645 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Sox6P40645 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sox6P40645 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Sox6P40645 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC5.79□□□□□ -1.48
Sox6P40645 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sox6P40645 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC5.79□□□□□ -1.48
Sox6P40645 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Sox6P40645 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Sox6P40645 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Sox6P40645 Gm42544-201ENSMUST00000197868 3242 ntBASIC5.79□□□□□ -1.48
Sox6P40645 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sox6P40645 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sox6P40645 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sox6P40645 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC5.78□□□□□ -1.48
Sox6P40645 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Sox6P40645 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Sox6P40645 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.78□□□□□ -1.48
Sox6P40645 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sox6P40645 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sox6P40645 AC164092.3-201ENSMUST00000216970 1323 ntBASIC5.78□□□□□ -1.48
Sox6P40645 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Sox6P40645 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Sox6P40645 Gm42781-201ENSMUST00000201317 2719 ntBASIC5.78□□□□□ -1.48
Sox6P40645 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sox6P40645 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sox6P40645 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sox6P40645 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Sox6P40645 Gm37703-201ENSMUST00000192292 1784 ntBASIC5.78□□□□□ -1.48
Sox6P40645 AC124516.3-201ENSMUST00000221302 3613 ntBASIC5.78□□□□□ -1.48
Sox6P40645 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC5.78□□□□□ -1.48
Sox6P40645 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.78□□□□□ -1.48
Sox6P40645 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Sox6P40645 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC5.78□□□□□ -1.48
Sox6P40645 Gm13207-201ENSMUST00000119862 773 ntBASIC5.78□□□□□ -1.48
Sox6P40645 Gm12115-201ENSMUST00000119969 447 ntBASIC5.78□□□□□ -1.48
Sox6P40645 Gm16511-201ENSMUST00000120019 564 ntBASIC5.78□□□□□ -1.48
Sox6P40645 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC5.78□□□□□ -1.48
Sox6P40645 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Sox6P40645 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sox6P40645 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Sox6P40645 Gm23632-201ENSMUST00000175289 125 ntBASIC5.78□□□□□ -1.48
Sox6P40645 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC5.78□□□□□ -1.48
Sox6P40645 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC5.78□□□□□ -1.48
Sox6P40645 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
Sox6P40645 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Sox6P40645 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Sox6P40645 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Sox6P40645 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Sox6P40645 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Sox6P40645 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Sox6P40645 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sox6P40645 Gm29605-201ENSMUST00000190800 292 ntBASIC5.78□□□□□ -1.48
Sox6P40645 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC5.78□□□□□ -1.48
Sox6P40645 Gm43243-201ENSMUST00000199964 278 ntBASIC5.78□□□□□ -1.48
Sox6P40645 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC5.78□□□□□ -1.48
Sox6P40645 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC5.78□□□□□ -1.48
Sox6P40645 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sox6P40645 Gm2996-201ENSMUST00000211398 537 ntBASIC5.78□□□□□ -1.48
Sox6P40645 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Sox6P40645 AC163621.1-201ENSMUST00000220695 379 ntBASIC5.78□□□□□ -1.48
Sox6P40645 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Sox6P40645 Gm18940-201ENSMUST00000222518 871 ntBASIC5.78□□□□□ -1.48
Sox6P40645 AC133598.3-204ENSMUST00000224260 767 ntBASIC5.78□□□□□ -1.48
Sox6P40645 AC158750.1-201ENSMUST00000226163 634 ntBASIC5.78□□□□□ -1.48
Sox6P40645 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sox6P40645 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sox6P40645 Gm10205-201ENSMUST00000087431 234 ntBASIC5.78□□□□□ -1.48
Sox6P40645 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Sox6P40645 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.78□□□□□ -1.48
Sox6P40645 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.78□□□□□ -1.48
Sox6P40645 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Sox6P40645 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sox6P40645 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Sox6P40645 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sox6P40645 Gm44735-201ENSMUST00000206197 1752 ntBASIC5.78□□□□□ -1.48
Sox6P40645 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Sox6P40645 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Sox6P40645 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC5.77□□□□□ -1.49
Sox6P40645 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Sox6P40645 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Sox6P40645 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sox6P40645 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sox6P40645 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sox6P40645 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Sox6P40645 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC5.77□□□□□ -1.49
Sox6P40645 Gm5949-201ENSMUST00000213468 1421 ntBASIC5.77□□□□□ -1.49
Sox6P40645 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC5.77□□□□□ -1.49
Sox6P40645 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Sox6P40645 Gm43611-201ENSMUST00000196656 4352 ntBASIC5.77□□□□□ -1.49
Sox6P40645 Gm12937-201ENSMUST00000118333 448 ntBASIC5.77□□□□□ -1.49
Sox6P40645 Gm11445-201ENSMUST00000119101 532 ntBASIC5.77□□□□□ -1.49
Sox6P40645 Gm7571-201ENSMUST00000120252 927 ntBASIC5.77□□□□□ -1.49
Sox6P40645 Gm7494-201ENSMUST00000121248 441 ntBASIC5.77□□□□□ -1.49
Sox6P40645 Gm15502-201ENSMUST00000121449 208 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms