Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Chd1P40201 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC9.17□□□□□ -0.94
Chd1P40201 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Chd1P40201 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Chd1P40201 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC9.17□□□□□ -0.94
Chd1P40201 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC9.17□□□□□ -0.94
Chd1P40201 Gm45457-201ENSMUST00000209931 3089 ntBASIC9.17□□□□□ -0.94
Chd1P40201 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC9.17□□□□□ -0.94
Chd1P40201 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC9.17□□□□□ -0.94
Chd1P40201 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC9.17□□□□□ -0.94
Chd1P40201 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC9.17□□□□□ -0.94
Chd1P40201 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Chd1P40201 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Chd1P40201 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Chd1P40201 AC164107.1-202ENSMUST00000228953 1816 ntBASIC9.17□□□□□ -0.94
Chd1P40201 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Chd1P40201 Anln-201ENSMUST00000040912 4605 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Chd1P40201 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Chd1P40201 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Chd1P40201 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Chd1P40201 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Chd1P40201 Ccdc141-207ENSMUST00000164114 6222 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Chd1P40201 Srcap-206ENSMUST00000186954 9345 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Chd1P40201 Gm37653-201ENSMUST00000195401 3578 ntBASIC9.17□□□□□ -0.94
Chd1P40201 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC9.17□□□□□ -0.94
Chd1P40201 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Chd1P40201 Gm26318-201ENSMUST00000176507 96 ntBASIC9.17□□□□□ -0.94
Chd1P40201 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Chd1P40201 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Chd1P40201 Gm29284-201ENSMUST00000188363 255 ntBASIC9.17□□□□□ -0.94
Chd1P40201 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Chd1P40201 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC9.17□□□□□ -0.94
Chd1P40201 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC9.17□□□□□ -0.94
Chd1P40201 CT030124.1-201ENSMUST00000217130 235 ntBASIC9.17□□□□□ -0.94
Chd1P40201 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Chd1P40201 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Chd1P40201 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Chd1P40201 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Chd1P40201 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Chd1P40201 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Chd1P40201 Gabra1-205ENSMUST00000205546 4045 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Chd1P40201 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Chd1P40201 Greb1-201ENSMUST00000048064 7940 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Chd1P40201 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Chd1P40201 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Chd1P40201 Ehbp1-201ENSMUST00000045167 4821 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Chd1P40201 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Chd1P40201 Pcdh11x-201ENSMUST00000050239 4442 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Chd1P40201 Gm9877-201ENSMUST00000064271 2627 ntBASIC9.16□□□□□ -0.94
Chd1P40201 Gria3-201ENSMUST00000076349 5192 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Chd1P40201 Gm16128-201ENSMUST00000117855 626 ntBASIC9.16□□□□□ -0.94
Chd1P40201 Gm12181-201ENSMUST00000121448 531 ntBASIC9.16□□□□□ -0.94
Chd1P40201 Gm24692-201ENSMUST00000157761 146 ntBASIC9.16□□□□□ -0.94
Chd1P40201 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Chd1P40201 Gm9457-201ENSMUST00000180176 372 ntBASIC9.16□□□□□ -0.94
Chd1P40201 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC9.16□□□□□ -0.94
Chd1P40201 AC154436.2-201ENSMUST00000227408 208 ntBASIC9.16□□□□□ -0.94
Chd1P40201 Mir449a-201ENSMUST00000083641 91 ntBASIC9.16□□□□□ -0.94
Chd1P40201 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Chd1P40201 Gm18194-202ENSMUST00000210952 3442 ntBASIC9.16□□□□□ -0.94
Chd1P40201 Zfp709-203ENSMUST00000188685 7186 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Chd1P40201 4930471D02Rik-201ENSMUST00000180815 2075 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Chd1P40201 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Chd1P40201 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Chd1P40201 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Chd1P40201 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Chd1P40201 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC9.15□□□□□ -0.94
Chd1P40201 AC158988.1-201ENSMUST00000226731 2624 ntBASIC9.15□□□□□ -0.94
Chd1P40201 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Chd1P40201 Sptbn1-202ENSMUST00000011877 8238 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Chd1P40201 Cep57l1-205ENSMUST00000187143 1769 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Chd1P40201 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Chd1P40201 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Chd1P40201 Pak7-202ENSMUST00000077200 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Chd1P40201 Cdh23-204ENSMUST00000105463 10991 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Chd1P40201 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Chd1P40201 Gm26376-201ENSMUST00000104784 110 ntBASIC9.15□□□□□ -0.94
Chd1P40201 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC9.15□□□□□ -0.94
Chd1P40201 Gm12488-201ENSMUST00000122449 499 ntBASIC9.15□□□□□ -0.94
Chd1P40201 Gm11507-201ENSMUST00000156462 412 ntBASIC9.15□□□□□ -0.94
Chd1P40201 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC9.15□□□□□ -0.94
Chd1P40201 Mir6539-201ENSMUST00000183732 110 ntBASIC9.15□□□□□ -0.94
Chd1P40201 Gm27541-201ENSMUST00000184078 122 ntBASIC9.15□□□□□ -0.94
Chd1P40201 Gm28066-201ENSMUST00000188657 472 ntBASIC9.15□□□□□ -0.94
Chd1P40201 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC9.15□□□□□ -0.94
Chd1P40201 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Chd1P40201 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC9.15□□□□□ -0.94
Chd1P40201 Gm18468-201ENSMUST00000207321 369 ntBASIC9.15□□□□□ -0.94
Chd1P40201 Gm18470-201ENSMUST00000207467 420 ntBASIC9.15□□□□□ -0.94
Chd1P40201 Gm18465-201ENSMUST00000207468 369 ntBASIC9.15□□□□□ -0.94
Chd1P40201 Gm18464-201ENSMUST00000207803 420 ntBASIC9.15□□□□□ -0.94
Chd1P40201 Gm18458-201ENSMUST00000207908 369 ntBASIC9.15□□□□□ -0.94
Chd1P40201 Gm18461-201ENSMUST00000208421 420 ntBASIC9.15□□□□□ -0.94
Chd1P40201 AC161383.1-201ENSMUST00000227356 527 ntBASIC9.15□□□□□ -0.94
Chd1P40201 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Chd1P40201 Vmn1r44-212ENSMUST00000228183 1838 ntBASIC9.15□□□□□ -0.94
Chd1P40201 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Chd1P40201 Gm37107-201ENSMUST00000195326 2552 ntBASIC9.15□□□□□ -0.94
Chd1P40201 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Chd1P40201 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms