Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm44530-201ENSMUST00000207920 3559 ntBASIC7.3□□□□□ -1.24
Traf1P39428 Gm38105-201ENSMUST00000192112 2621 ntBASIC7.3□□□□□ -1.24
Traf1P39428 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Traf1P39428 M6pr-ps-201ENSMUST00000120481 830 ntBASIC7.3□□□□□ -1.24
Traf1P39428 Gm13578-201ENSMUST00000120849 590 ntBASIC7.3□□□□□ -1.24
Traf1P39428 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC7.3□□□□□ -1.24
Traf1P39428 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC7.3□□□□□ -1.24
Traf1P39428 Gm17366-201ENSMUST00000167629 187 ntBASIC7.3□□□□□ -1.24
Traf1P39428 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC7.3□□□□□ -1.24
Traf1P39428 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC7.3□□□□□ -1.24
Traf1P39428 Gm8506-201ENSMUST00000186661 829 ntBASIC7.3□□□□□ -1.24
Traf1P39428 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC7.3□□□□□ -1.24
Traf1P39428 Gm37604-201ENSMUST00000191749 1272 ntBASIC7.3□□□□□ -1.24
Traf1P39428 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC7.3□□□□□ -1.24
Traf1P39428 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Traf1P39428 Gm18467-201ENSMUST00000208805 434 ntBASIC7.3□□□□□ -1.24
Traf1P39428 Gm4803-201ENSMUST00000218729 1279 ntBASIC7.3□□□□□ -1.24
Traf1P39428 AC131654.1-201ENSMUST00000219675 745 ntBASIC7.3□□□□□ -1.24
Traf1P39428 Gm5436-201ENSMUST00000058103 643 ntBASIC7.3□□□□□ -1.24
Traf1P39428 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Traf1P39428 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Traf1P39428 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Traf1P39428 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Traf1P39428 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Traf1P39428 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Traf1P39428 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
Traf1P39428 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Traf1P39428 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Traf1P39428 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Traf1P39428 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Traf1P39428 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Traf1P39428 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Traf1P39428 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Traf1P39428 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Traf1P39428 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC7.29□□□□□ -1.24
Traf1P39428 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC7.29□□□□□ -1.24
Traf1P39428 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Traf1P39428 Gm38142-201ENSMUST00000194093 3555 ntBASIC7.29□□□□□ -1.24
Traf1P39428 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC7.29□□□□□ -1.24
Traf1P39428 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Traf1P39428 Gm15182-201ENSMUST00000120832 1676 ntBASIC7.29□□□□□ -1.24
Traf1P39428 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Traf1P39428 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Traf1P39428 Gm37076-201ENSMUST00000192033 2294 ntBASIC7.29□□□□□ -1.24
Traf1P39428 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC7.29□□□□□ -1.24
Traf1P39428 Gm24434-201ENSMUST00000104081 132 ntBASIC7.29□□□□□ -1.24
Traf1P39428 Gm14659-201ENSMUST00000117667 843 ntBASIC7.29□□□□□ -1.24
Traf1P39428 Gm12937-201ENSMUST00000118333 448 ntBASIC7.29□□□□□ -1.24
Traf1P39428 Gm4914-201ENSMUST00000119757 459 ntBASIC7.29□□□□□ -1.24
Traf1P39428 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Traf1P39428 Gm8185-201ENSMUST00000160999 669 ntBASIC7.29□□□□□ -1.24
Traf1P39428 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Traf1P39428 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Traf1P39428 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Traf1P39428 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Traf1P39428 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Traf1P39428 Gm27210-201ENSMUST00000184263 402 ntBASIC7.29□□□□□ -1.24
Traf1P39428 Gm37463-201ENSMUST00000193819 796 ntBASIC7.29□□□□□ -1.24
Traf1P39428 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC7.29□□□□□ -1.24
Traf1P39428 Gm34768-201ENSMUST00000193884 565 ntBASIC7.29□□□□□ -1.24
Traf1P39428 Gm8869-201ENSMUST00000195222 947 ntBASIC7.29□□□□□ -1.24
Traf1P39428 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC7.29□□□□□ -1.24
Traf1P39428 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Traf1P39428 Gm45070-201ENSMUST00000208100 246 ntBASIC7.29□□□□□ -1.24
Traf1P39428 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC7.29□□□□□ -1.24
Traf1P39428 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Traf1P39428 AC129597.1-201ENSMUST00000223046 1234 ntBASIC7.29□□□□□ -1.24
Traf1P39428 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Traf1P39428 Gm26226-201ENSMUST00000082509 116 ntBASIC7.29□□□□□ -1.24
Traf1P39428 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Traf1P39428 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Traf1P39428 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Traf1P39428 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Traf1P39428 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Traf1P39428 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Traf1P39428 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Traf1P39428 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC7.29□□□□□ -1.24
Traf1P39428 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC7.29□□□□□ -1.24
Traf1P39428 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC7.29□□□□□ -1.24
Traf1P39428 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC7.29□□□□□ -1.24
Traf1P39428 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC7.29□□□□□ -1.24
Traf1P39428 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC7.29□□□□□ -1.24
Traf1P39428 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC7.29□□□□□ -1.24
Traf1P39428 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC7.29□□□□□ -1.24
Traf1P39428 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC7.29□□□□□ -1.24
Traf1P39428 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC7.29□□□□□ -1.24
Traf1P39428 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC7.29□□□□□ -1.24
Traf1P39428 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC7.29□□□□□ -1.24
Traf1P39428 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC7.29□□□□□ -1.24
Traf1P39428 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC7.29□□□□□ -1.24
Traf1P39428 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC7.29□□□□□ -1.24
Traf1P39428 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC7.29□□□□□ -1.24
Traf1P39428 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC7.29□□□□□ -1.24
Traf1P39428 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC7.29□□□□□ -1.24
Traf1P39428 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC7.29□□□□□ -1.24
Traf1P39428 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC7.29□□□□□ -1.24
Traf1P39428 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC7.29□□□□□ -1.24
Traf1P39428 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC7.29□□□□□ -1.24
Traf1P39428 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Traf1P39428 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC7.29□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 94.1 ms