Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC6.28□□□□□ -1.4
Hoxc11P31313 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxc11P31313 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxc11P31313 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC6.28□□□□□ -1.4
Hoxc11P31313 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxc11P31313 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxc11P31313 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxc11P31313 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
Hoxc11P31313 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxc11P31313 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxc11P31313 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
Hoxc11P31313 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
Hoxc11P31313 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
Hoxc11P31313 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
Hoxc11P31313 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
Hoxc11P31313 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
Hoxc11P31313 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxc11P31313 Gm43360-201ENSMUST00000197656 2887 ntBASIC6.28□□□□□ -1.4
Hoxc11P31313 Gm18422-202ENSMUST00000203798 2214 ntBASIC6.27□□□□□ -1.4
Hoxc11P31313 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hoxc11P31313 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Hoxc11P31313 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Hoxc11P31313 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Hoxc11P31313 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
Hoxc11P31313 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hoxc11P31313 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Hoxc11P31313 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hoxc11P31313 Gm26146-201ENSMUST00000104478 185 ntBASIC6.27□□□□□ -1.41
Hoxc11P31313 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC6.27□□□□□ -1.41
Hoxc11P31313 Gm13930-201ENSMUST00000118569 368 ntBASIC6.27□□□□□ -1.41
Hoxc11P31313 Gm16016-201ENSMUST00000120831 550 ntBASIC6.27□□□□□ -1.41
Hoxc11P31313 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC6.27□□□□□ -1.41
Hoxc11P31313 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Hoxc11P31313 Gm22923-201ENSMUST00000174952 110 ntBASIC6.27□□□□□ -1.41
Hoxc11P31313 Gm24561-201ENSMUST00000175182 95 ntBASIC6.27□□□□□ -1.41
Hoxc11P31313 Gm21959-201ENSMUST00000178439 452 ntBASIC6.27□□□□□ -1.41
Hoxc11P31313 Gm27998-201ENSMUST00000184902 361 ntBASIC6.27□□□□□ -1.41
Hoxc11P31313 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC6.27□□□□□ -1.41
Hoxc11P31313 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC6.27□□□□□ -1.41
Hoxc11P31313 Gm18600-201ENSMUST00000207205 505 ntBASIC6.27□□□□□ -1.41
Hoxc11P31313 Gm5055-201ENSMUST00000215697 581 ntBASIC6.27□□□□□ -1.41
Hoxc11P31313 AC073562.1-201ENSMUST00000222117 401 ntBASIC6.27□□□□□ -1.41
Hoxc11P31313 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hoxc11P31313 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hoxc11P31313 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hoxc11P31313 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hoxc11P31313 Gm6818-201ENSMUST00000190556 2558 ntBASIC6.27□□□□□ -1.41
Hoxc11P31313 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hoxc11P31313 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Hoxc11P31313 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
Hoxc11P31313 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Hoxc11P31313 Gm37082-201ENSMUST00000192629 1927 ntBASIC6.27□□□□□ -1.41
Hoxc11P31313 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hoxc11P31313 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC6.27□□□□□ -1.41
Hoxc11P31313 Gm37255-201ENSMUST00000193302 3060 ntBASIC6.27□□□□□ -1.41
Hoxc11P31313 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Hoxc11P31313 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Hoxc11P31313 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxc11P31313 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC6.26□□□□□ -1.41
Hoxc11P31313 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxc11P31313 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxc11P31313 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Hoxc11P31313 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Hoxc11P31313 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxc11P31313 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxc11P31313 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
Hoxc11P31313 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxc11P31313 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxc11P31313 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxc11P31313 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxc11P31313 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxc11P31313 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Hoxc11P31313 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Hoxc11P31313 Gm23311-201ENSMUST00000104152 134 ntBASIC6.26□□□□□ -1.41
Hoxc11P31313 n-R5s178-201ENSMUST00000104249 114 ntBASIC6.26□□□□□ -1.41
Hoxc11P31313 Gm26143-201ENSMUST00000104480 108 ntBASIC6.26□□□□□ -1.41
Hoxc11P31313 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC6.26□□□□□ -1.41
Hoxc11P31313 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxc11P31313 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC6.26□□□□□ -1.41
Hoxc11P31313 Gm14870-201ENSMUST00000118414 156 ntBASIC6.26□□□□□ -1.41
Hoxc11P31313 Gm15040-201ENSMUST00000118561 1241 ntBASIC6.26□□□□□ -1.41
Hoxc11P31313 Gm15621-201ENSMUST00000119162 364 ntBASIC6.26□□□□□ -1.41
Hoxc11P31313 Gm14938-201ENSMUST00000119482 943 ntBASIC6.26□□□□□ -1.41
Hoxc11P31313 Gm15780-201ENSMUST00000121283 935 ntBASIC6.26□□□□□ -1.41
Hoxc11P31313 Gm11879-201ENSMUST00000121885 702 ntBASIC6.26□□□□□ -1.41
Hoxc11P31313 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC6.26□□□□□ -1.41
Hoxc11P31313 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC6.26□□□□□ -1.41
Hoxc11P31313 Gm25374-201ENSMUST00000158158 101 ntBASIC6.26□□□□□ -1.41
Hoxc11P31313 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC6.26□□□□□ -1.41
Hoxc11P31313 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Hoxc11P31313 Gm28665-201ENSMUST00000189269 670 ntBASIC6.26□□□□□ -1.41
Hoxc11P31313 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC6.26□□□□□ -1.41
Hoxc11P31313 Gm37005-201ENSMUST00000193281 1164 ntBASIC6.26□□□□□ -1.41
Hoxc11P31313 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
Hoxc11P31313 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC6.26□□□□□ -1.41
Hoxc11P31313 Gm43157-201ENSMUST00000198223 412 ntBASIC6.26□□□□□ -1.41
Hoxc11P31313 Gm36448-201ENSMUST00000199916 438 ntBASIC6.26□□□□□ -1.41
Hoxc11P31313 Gm43850-201ENSMUST00000202021 578 ntBASIC6.26□□□□□ -1.41
Hoxc11P31313 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC6.26□□□□□ -1.41
Hoxc11P31313 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 118 ms