Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Col2a1P28481 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Col2a1P28481 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Col2a1P28481 Gm9877-201ENSMUST00000064271 2627 ntBASIC6.95□□□□□ -1.3
Col2a1P28481 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Col2a1P28481 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col2a1P28481 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Col2a1P28481 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col2a1P28481 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Col2a1P28481 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC6.95□□□□□ -1.3
Col2a1P28481 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
Col2a1P28481 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Col2a1P28481 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
Col2a1P28481 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col2a1P28481 Gm7700-201ENSMUST00000120273 970 ntBASIC6.95□□□□□ -1.3
Col2a1P28481 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC6.95□□□□□ -1.3
Col2a1P28481 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC6.95□□□□□ -1.3
Col2a1P28481 Gm26372-201ENSMUST00000157831 236 ntBASIC6.95□□□□□ -1.3
Col2a1P28481 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC6.95□□□□□ -1.3
Col2a1P28481 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Col2a1P28481 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Col2a1P28481 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Col2a1P28481 Gm38181-201ENSMUST00000181357 720 ntBASIC6.95□□□□□ -1.3
Col2a1P28481 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col2a1P28481 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col2a1P28481 Gm18407-201ENSMUST00000192126 790 ntBASIC6.95□□□□□ -1.3
Col2a1P28481 Gm31211-201ENSMUST00000199170 253 ntBASIC6.95□□□□□ -1.3
Col2a1P28481 Gm5886-202ENSMUST00000203957 522 ntBASIC6.95□□□□□ -1.3
Col2a1P28481 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC6.95□□□□□ -1.3
Col2a1P28481 Gm45596-201ENSMUST00000209279 434 ntBASIC6.95□□□□□ -1.3
Col2a1P28481 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC6.95□□□□□ -1.3
Col2a1P28481 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC6.95□□□□□ -1.3
Col2a1P28481 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC6.95□□□□□ -1.3
Col2a1P28481 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Col2a1P28481 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col2a1P28481 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Col2a1P28481 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Col2a1P28481 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col2a1P28481 AC174797.5-201ENSMUST00000225055 1860 ntBASIC6.95□□□□□ -1.3
Col2a1P28481 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Col2a1P28481 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC6.95□□□□□ -1.3
Col2a1P28481 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC6.95□□□□□ -1.3
Col2a1P28481 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Col2a1P28481 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC6.95□□□□□ -1.3
Col2a1P28481 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Col2a1P28481 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Col2a1P28481 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Col2a1P28481 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Col2a1P28481 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col2a1P28481 AC167013.5-201ENSMUST00000227597 2947 ntBASIC6.94□□□□□ -1.3
Col2a1P28481 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Col2a1P28481 AC135669.2-201ENSMUST00000215636 4958 ntBASIC6.94□□□□□ -1.3
Col2a1P28481 Gm37880-201ENSMUST00000192216 3257 ntBASIC6.94□□□□□ -1.3
Col2a1P28481 Gm43857-201ENSMUST00000200343 3079 ntBASIC6.94□□□□□ -1.3
Col2a1P28481 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Col2a1P28481 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC6.94□□□□□ -1.3
Col2a1P28481 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC6.94□□□□□ -1.3
Col2a1P28481 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Col2a1P28481 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
Col2a1P28481 Gm13866-201ENSMUST00000118901 968 ntBASIC6.94□□□□□ -1.3
Col2a1P28481 Gm12293-201ENSMUST00000121898 590 ntBASIC6.94□□□□□ -1.3
Col2a1P28481 Gm24065-201ENSMUST00000157487 264 ntBASIC6.94□□□□□ -1.3
Col2a1P28481 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC6.94□□□□□ -1.3
Col2a1P28481 Gm8323-201ENSMUST00000168436 1201 ntBASIC6.94□□□□□ -1.3
Col2a1P28481 Gm2877-201ENSMUST00000178248 1204 ntBASIC6.94□□□□□ -1.3
Col2a1P28481 Gm8324-201ENSMUST00000178911 1204 ntBASIC6.94□□□□□ -1.3
Col2a1P28481 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col2a1P28481 Gm2871-201ENSMUST00000179984 1204 ntBASIC6.94□□□□□ -1.3
Col2a1P28481 Gm28066-201ENSMUST00000188657 472 ntBASIC6.94□□□□□ -1.3
Col2a1P28481 Igkv4-75-201ENSMUST00000197204 359 ntBASIC6.94□□□□□ -1.3
Col2a1P28481 Gm9269-201ENSMUST00000221661 578 ntBASIC6.94□□□□□ -1.3
Col2a1P28481 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC6.94□□□□□ -1.3
Col2a1P28481 Gm44667-201ENSMUST00000207632 3337 ntBASIC6.94□□□□□ -1.3
Col2a1P28481 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col2a1P28481 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Col2a1P28481 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col2a1P28481 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC6.94□□□□□ -1.3
Col2a1P28481 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col2a1P28481 Ap5m1-208ENSMUST00000228238 3514 ntBASIC6.94□□□□□ -1.3
Col2a1P28481 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Col2a1P28481 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Col2a1P28481 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC6.94□□□□□ -1.3
Col2a1P28481 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
Col2a1P28481 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Col2a1P28481 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC6.93□□□□□ -1.3
Col2a1P28481 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC6.93□□□□□ -1.3
Col2a1P28481 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC6.93□□□□□ -1.3
Col2a1P28481 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
Col2a1P28481 Gm11990-201ENSMUST00000121505 897 ntBASIC6.93□□□□□ -1.3
Col2a1P28481 Gm12488-201ENSMUST00000122449 499 ntBASIC6.93□□□□□ -1.3
Col2a1P28481 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC6.93□□□□□ -1.3
Col2a1P28481 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC6.93□□□□□ -1.3
Col2a1P28481 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC6.93□□□□□ -1.3
Col2a1P28481 Gm25439-201ENSMUST00000158280 131 ntBASIC6.93□□□□□ -1.3
Col2a1P28481 Gm1972-201ENSMUST00000181606 964 ntBASIC6.93□□□□□ -1.3
Col2a1P28481 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC6.93□□□□□ -1.3
Col2a1P28481 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC6.93□□□□□ -1.3
Col2a1P28481 Gm42814-201ENSMUST00000199370 460 ntBASIC6.93□□□□□ -1.3
Col2a1P28481 Mir219c-201ENSMUST00000199860 60 ntBASIC6.93□□□□□ -1.3
Col2a1P28481 Gm44053-201ENSMUST00000203364 929 ntBASIC6.93□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms