Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm6490-201ENSMUST00000111862 461 ntBASIC4.93□□□□□ -1.62
Sdc1P18828 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
Sdc1P18828 Gm13423-201ENSMUST00000117205 888 ntBASIC4.93□□□□□ -1.62
Sdc1P18828 Gm12635-201ENSMUST00000117285 752 ntBASIC4.93□□□□□ -1.62
Sdc1P18828 Gm14098-201ENSMUST00000119295 623 ntBASIC4.93□□□□□ -1.62
Sdc1P18828 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC4.93□□□□□ -1.62
Sdc1P18828 Gm14156-201ENSMUST00000121538 483 ntBASIC4.93□□□□□ -1.62
Sdc1P18828 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Sdc1P18828 Gm11739-201ENSMUST00000125269 723 ntTSL 3 BASIC4.93□□□□□ -1.62
Sdc1P18828 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC4.93□□□□□ -1.62
Sdc1P18828 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Sdc1P18828 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC4.93□□□□□ -1.62
Sdc1P18828 Gm22604-201ENSMUST00000157604 311 ntBASIC4.93□□□□□ -1.62
Sdc1P18828 Gm22160-201ENSMUST00000158405 328 ntBASIC4.93□□□□□ -1.62
Sdc1P18828 Gm8032-201ENSMUST00000171009 574 ntBASIC4.93□□□□□ -1.62
Sdc1P18828 Gm17223-201ENSMUST00000171413 481 ntBASIC4.93□□□□□ -1.62
Sdc1P18828 Rbx1-ps-201ENSMUST00000173786 327 ntBASIC4.93□□□□□ -1.62
Sdc1P18828 Mir5128-201ENSMUST00000175217 84 ntBASIC4.93□□□□□ -1.62
Sdc1P18828 Gm18006-201ENSMUST00000177411 662 ntBASIC4.93□□□□□ -1.62
Sdc1P18828 Pea15b-201ENSMUST00000182806 387 ntBASIC4.93□□□□□ -1.62
Sdc1P18828 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Sdc1P18828 Gm43089-201ENSMUST00000199162 275 ntBASIC4.93□□□□□ -1.62
Sdc1P18828 Gm44809-201ENSMUST00000208305 993 ntBASIC4.93□□□□□ -1.62
Sdc1P18828 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
Sdc1P18828 AC164550.1-201ENSMUST00000217821 1066 ntBASIC4.93□□□□□ -1.62
Sdc1P18828 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC4.93□□□□□ -1.62
Sdc1P18828 Gm8137-201ENSMUST00000218997 463 ntBASIC4.93□□□□□ -1.62
Sdc1P18828 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Sdc1P18828 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Sdc1P18828 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Sdc1P18828 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Sdc1P18828 Desi2-202ENSMUST00000069568 1193 ntBASIC4.93□□□□□ -1.62
Sdc1P18828 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Sdc1P18828 Gm24621-201ENSMUST00000082679 140 ntBASIC4.93□□□□□ -1.62
Sdc1P18828 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Sdc1P18828 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Sdc1P18828 Gm17165-201ENSMUST00000096155 493 ntBASIC4.93□□□□□ -1.62
Sdc1P18828 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Sdc1P18828 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC4.93□□□□□ -1.62
Sdc1P18828 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Sdc1P18828 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Sdc1P18828 Gm8853-201ENSMUST00000198366 1344 ntBASIC4.93□□□□□ -1.62
Sdc1P18828 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Sdc1P18828 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC4.93□□□□□ -1.62
Sdc1P18828 Dennd6a-204ENSMUST00000224248 2775 ntBASIC4.93□□□□□ -1.62
Sdc1P18828 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Sdc1P18828 Gm37456-201ENSMUST00000193176 5837 ntBASIC4.92□□□□□ -1.62
Sdc1P18828 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Sdc1P18828 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC4.92□□□□□ -1.62
Sdc1P18828 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Sdc1P18828 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Sdc1P18828 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Sdc1P18828 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC4.92□□□□□ -1.62
Sdc1P18828 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
Sdc1P18828 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC4.92□□□□□ -1.62
Sdc1P18828 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Sdc1P18828 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Sdc1P18828 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Sdc1P18828 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Sdc1P18828 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Sdc1P18828 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Sdc1P18828 Gm42658-201ENSMUST00000197199 1575 ntBASIC4.92□□□□□ -1.62
Sdc1P18828 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Sdc1P18828 Mir704-201ENSMUST00000102106 77 ntBASIC4.92□□□□□ -1.62
Sdc1P18828 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Sdc1P18828 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Sdc1P18828 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC4.92□□□□□ -1.62
Sdc1P18828 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC4.92□□□□□ -1.62
Sdc1P18828 Gm13754-201ENSMUST00000120486 998 ntBASIC4.92□□□□□ -1.62
Sdc1P18828 Gm12140-201ENSMUST00000121214 544 ntBASIC4.92□□□□□ -1.62
Sdc1P18828 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC4.92□□□□□ -1.62
Sdc1P18828 Banf2os-202ENSMUST00000145504 386 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Sdc1P18828 Gm8185-201ENSMUST00000160999 669 ntBASIC4.92□□□□□ -1.62
Sdc1P18828 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Sdc1P18828 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Sdc1P18828 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Sdc1P18828 Gm17786-201ENSMUST00000182000 427 ntBASIC4.92□□□□□ -1.62
Sdc1P18828 BC065403-202ENSMUST00000184796 1043 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Sdc1P18828 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Sdc1P18828 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC4.92□□□□□ -1.62
Sdc1P18828 Gm18351-201ENSMUST00000188646 883 ntBASIC4.92□□□□□ -1.62
Sdc1P18828 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC4.92□□□□□ -1.62
Sdc1P18828 Gm43147-201ENSMUST00000196944 542 ntBASIC4.92□□□□□ -1.62
Sdc1P18828 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Sdc1P18828 Gm5711-201ENSMUST00000197896 421 ntBASIC4.92□□□□□ -1.62
Sdc1P18828 Gm42824-201ENSMUST00000199361 247 ntBASIC4.92□□□□□ -1.62
Sdc1P18828 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Sdc1P18828 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC4.92□□□□□ -1.62
Sdc1P18828 Gm19653-201ENSMUST00000204326 1039 ntBASIC4.92□□□□□ -1.62
Sdc1P18828 Gm44134-202ENSMUST00000204777 545 ntBASIC4.92□□□□□ -1.62
Sdc1P18828 Gm5318-201ENSMUST00000205249 406 ntBASIC4.92□□□□□ -1.62
Sdc1P18828 Gm9357-201ENSMUST00000207138 805 ntBASIC4.92□□□□□ -1.62
Sdc1P18828 Gm17992-201ENSMUST00000207346 1072 ntBASIC4.92□□□□□ -1.62
Sdc1P18828 Gm2975-201ENSMUST00000209710 820 ntBASIC4.92□□□□□ -1.62
Sdc1P18828 Gm45764-201ENSMUST00000213047 571 ntTSL 5 BASIC4.92□□□□□ -1.62
Sdc1P18828 Gm45722-201ENSMUST00000213075 466 ntBASIC4.92□□□□□ -1.62
Sdc1P18828 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC4.92□□□□□ -1.62
Sdc1P18828 AC118230.1-201ENSMUST00000220196 656 ntBASIC4.92□□□□□ -1.62
Sdc1P18828 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Sdc1P18828 AC165154.2-201ENSMUST00000227310 336 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms