Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC5.13□□□□□ -1.59
Cdx1P18111 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cdx1P18111 AC162301.1-201ENSMUST00000228785 1542 ntBASIC5.13□□□□□ -1.59
Cdx1P18111 Gm44416-201ENSMUST00000204055 2066 ntBASIC5.12□□□□□ -1.59
Cdx1P18111 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Cdx1P18111 AC121870.1-201ENSMUST00000216279 4879 ntBASIC5.12□□□□□ -1.59
Cdx1P18111 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Cdx1P18111 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Cdx1P18111 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Cdx1P18111 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Cdx1P18111 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Cdx1P18111 Gm37212-201ENSMUST00000192582 3650 ntBASIC5.12□□□□□ -1.59
Cdx1P18111 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Cdx1P18111 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Cdx1P18111 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Cdx1P18111 Gm22781-201ENSMUST00000104083 137 ntBASIC5.12□□□□□ -1.59
Cdx1P18111 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC5.12□□□□□ -1.59
Cdx1P18111 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC5.12□□□□□ -1.59
Cdx1P18111 Gm14610-201ENSMUST00000118358 966 ntBASIC5.12□□□□□ -1.59
Cdx1P18111 Gm14729-201ENSMUST00000118373 689 ntBASIC5.12□□□□□ -1.59
Cdx1P18111 Gm15712-201ENSMUST00000120369 1156 ntBASIC5.12□□□□□ -1.59
Cdx1P18111 Gm13754-201ENSMUST00000120486 998 ntBASIC5.12□□□□□ -1.59
Cdx1P18111 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Cdx1P18111 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Cdx1P18111 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC5.12□□□□□ -1.59
Cdx1P18111 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Cdx1P18111 Gm10364-202ENSMUST00000153034 1001 ntBASIC5.12□□□□□ -1.59
Cdx1P18111 Gm24057-201ENSMUST00000158616 302 ntBASIC5.12□□□□□ -1.59
Cdx1P18111 Gm3344-201ENSMUST00000169610 603 ntBASIC5.12□□□□□ -1.59
Cdx1P18111 Gm20545-201ENSMUST00000174739 210 ntBASIC5.12□□□□□ -1.59
Cdx1P18111 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC5.12□□□□□ -1.59
Cdx1P18111 Gm24756-201ENSMUST00000177002 96 ntBASIC5.12□□□□□ -1.59
Cdx1P18111 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Cdx1P18111 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC5.12□□□□□ -1.59
Cdx1P18111 Mrgprb13-201ENSMUST00000188191 985 ntBASIC5.12□□□□□ -1.59
Cdx1P18111 Gm28801-201ENSMUST00000188761 449 ntBASIC5.12□□□□□ -1.59
Cdx1P18111 Gm29605-201ENSMUST00000190800 292 ntBASIC5.12□□□□□ -1.59
Cdx1P18111 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Cdx1P18111 Gm42580-201ENSMUST00000197223 753 ntBASIC5.12□□□□□ -1.59
Cdx1P18111 Ighv1-83-201ENSMUST00000199643 351 ntBASIC5.12□□□□□ -1.59
Cdx1P18111 Gm43033-201ENSMUST00000199682 425 ntBASIC5.12□□□□□ -1.59
Cdx1P18111 AC099934.1-201ENSMUST00000200493 79 ntBASIC5.12□□□□□ -1.59
Cdx1P18111 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC5.12□□□□□ -1.59
Cdx1P18111 Gm43772-201ENSMUST00000202052 379 ntBASIC5.12□□□□□ -1.59
Cdx1P18111 Gm9357-201ENSMUST00000207138 805 ntBASIC5.12□□□□□ -1.59
Cdx1P18111 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC5.12□□□□□ -1.59
Cdx1P18111 Gm2975-201ENSMUST00000209710 820 ntBASIC5.12□□□□□ -1.59
Cdx1P18111 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC5.12□□□□□ -1.59
Cdx1P18111 Gm7351-201ENSMUST00000210745 580 ntBASIC5.12□□□□□ -1.59
Cdx1P18111 Gm34424-201ENSMUST00000213400 782 ntBASIC5.12□□□□□ -1.59
Cdx1P18111 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Cdx1P18111 AC187103.4-201ENSMUST00000225399 300 ntBASIC5.12□□□□□ -1.59
Cdx1P18111 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Cdx1P18111 Gm24451-201ENSMUST00000083353 133 ntBASIC5.12□□□□□ -1.59
Cdx1P18111 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
Cdx1P18111 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Cdx1P18111 Gm10307-201ENSMUST00000189839 1337 ntBASIC5.12□□□□□ -1.59
Cdx1P18111 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Cdx1P18111 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC5.12□□□□□ -1.59
Cdx1P18111 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Cdx1P18111 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Cdx1P18111 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC5.12□□□□□ -1.59
Cdx1P18111 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC5.12□□□□□ -1.59
Cdx1P18111 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Cdx1P18111 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.12□□□□□ -1.59
Cdx1P18111 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Cdx1P18111 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Cdx1P18111 Gm37535-201ENSMUST00000194442 2365 ntBASIC5.12□□□□□ -1.59
Cdx1P18111 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Cdx1P18111 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Cdx1P18111 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Cdx1P18111 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Cdx1P18111 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.11□□□□□ -1.59
Cdx1P18111 Gm24519-201ENSMUST00000104507 132 ntBASIC5.11□□□□□ -1.59
Cdx1P18111 Gm8534-201ENSMUST00000118553 766 ntBASIC5.11□□□□□ -1.59
Cdx1P18111 Gm14847-201ENSMUST00000121978 519 ntBASIC5.11□□□□□ -1.59
Cdx1P18111 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC5.11□□□□□ -1.59
Cdx1P18111 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC5.11□□□□□ -1.59
Cdx1P18111 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC5.11□□□□□ -1.59
Cdx1P18111 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Cdx1P18111 Gm7613-201ENSMUST00000139070 487 ntBASIC5.11□□□□□ -1.59
Cdx1P18111 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC5.11□□□□□ -1.59
Cdx1P18111 Gm22223-201ENSMUST00000157360 125 ntBASIC5.11□□□□□ -1.59
Cdx1P18111 Gm22728-201ENSMUST00000158087 129 ntBASIC5.11□□□□□ -1.59
Cdx1P18111 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Cdx1P18111 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC5.11□□□□□ -1.59
Cdx1P18111 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Cdx1P18111 Mir6989-201ENSMUST00000184812 65 ntBASIC5.11□□□□□ -1.59
Cdx1P18111 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC5.11□□□□□ -1.59
Cdx1P18111 Gm7867-201ENSMUST00000189856 546 ntBASIC5.11□□□□□ -1.59
Cdx1P18111 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC5.11□□□□□ -1.59
Cdx1P18111 Gm37439-201ENSMUST00000193150 856 ntBASIC5.11□□□□□ -1.59
Cdx1P18111 Gm37191-201ENSMUST00000193346 388 ntBASIC5.11□□□□□ -1.59
Cdx1P18111 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC5.11□□□□□ -1.59
Cdx1P18111 AC099760.1-201ENSMUST00000196300 153 ntBASIC5.11□□□□□ -1.59
Cdx1P18111 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC5.11□□□□□ -1.59
Cdx1P18111 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC5.11□□□□□ -1.59
Cdx1P18111 Gm43656-201ENSMUST00000197882 434 ntBASIC5.11□□□□□ -1.59
Cdx1P18111 Gm4860-201ENSMUST00000200368 454 ntBASIC5.11□□□□□ -1.59
Cdx1P18111 Gm44422-201ENSMUST00000204142 1025 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms