Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC7.2□□□□□ -1.26
Col1a1P11087 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC7.2□□□□□ -1.26
Col1a1P11087 Gm38370-201ENSMUST00000192545 1499 ntTSL 5 BASIC7.2□□□□□ -1.26
Col1a1P11087 Gm37462-201ENSMUST00000193386 1498 ntTSL 5 BASIC7.2□□□□□ -1.26
Col1a1P11087 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC7.2□□□□□ -1.26
Col1a1P11087 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC7.2□□□□□ -1.26
Col1a1P11087 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC7.2□□□□□ -1.26
Col1a1P11087 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC7.2□□□□□ -1.26
Col1a1P11087 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC7.2□□□□□ -1.26
Col1a1P11087 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC7.2□□□□□ -1.26
Col1a1P11087 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col1a1P11087 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col1a1P11087 Gm6150-202ENSMUST00000219888 2977 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col1a1P11087 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col1a1P11087 Trim66-202ENSMUST00000106739 9250 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col1a1P11087 Gm16205-201ENSMUST00000117720 1027 ntBASIC7.2□□□□□ -1.26
Col1a1P11087 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col1a1P11087 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC7.2□□□□□ -1.26
Col1a1P11087 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC7.2□□□□□ -1.26
Col1a1P11087 Gm37511-201ENSMUST00000192901 294 ntBASIC7.2□□□□□ -1.26
Col1a1P11087 Gm18628-201ENSMUST00000220584 475 ntBASIC7.2□□□□□ -1.26
Col1a1P11087 AC211878.1-201ENSMUST00000221668 474 ntBASIC7.2□□□□□ -1.26
Col1a1P11087 AC164164.2-201ENSMUST00000221809 785 ntBASIC7.2□□□□□ -1.26
Col1a1P11087 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col1a1P11087 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col1a1P11087 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC7.2□□□□□ -1.26
Col1a1P11087 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC7.2□□□□□ -1.26
Col1a1P11087 n-R5s215-201ENSMUST00000082480 104 ntBASIC7.2□□□□□ -1.26
Col1a1P11087 Gm25682-201ENSMUST00000083942 164 ntBASIC7.2□□□□□ -1.26
Col1a1P11087 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Col1a1P11087 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col1a1P11087 Gm232-201ENSMUST00000216549 2559 ntBASIC7.2□□□□□ -1.26
Col1a1P11087 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col1a1P11087 Gm8750-201ENSMUST00000173278 1537 ntBASIC7.2□□□□□ -1.26
Col1a1P11087 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Col1a1P11087 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col1a1P11087 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col1a1P11087 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Col1a1P11087 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC7.2□□□□□ -1.26
Col1a1P11087 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col1a1P11087 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Col1a1P11087 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col1a1P11087 Sec24c-202ENSMUST00000223751 4196 ntBASIC7.2□□□□□ -1.26
Col1a1P11087 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Col1a1P11087 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col1a1P11087 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Col1a1P11087 AC159006.2-201ENSMUST00000228734 4144 ntBASIC7.2□□□□□ -1.26
Col1a1P11087 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col1a1P11087 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col1a1P11087 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col1a1P11087 Gm28874-201ENSMUST00000190917 3134 ntBASIC7.19□□□□□ -1.26
Col1a1P11087 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Col1a1P11087 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Col1a1P11087 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col1a1P11087 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col1a1P11087 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Col1a1P11087 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col1a1P11087 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col1a1P11087 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Col1a1P11087 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col1a1P11087 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC7.19□□□□□ -1.26
Col1a1P11087 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
Col1a1P11087 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC7.19□□□□□ -1.26
Col1a1P11087 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
Col1a1P11087 Mup-ps19-201ENSMUST00000120390 519 ntBASIC7.19□□□□□ -1.26
Col1a1P11087 Gm22959-201ENSMUST00000122514 303 ntBASIC7.19□□□□□ -1.26
Col1a1P11087 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Col1a1P11087 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Col1a1P11087 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Col1a1P11087 Gm21241-201ENSMUST00000179551 934 ntBASIC7.19□□□□□ -1.26
Col1a1P11087 Gm27679-201ENSMUST00000184612 84 ntBASIC7.19□□□□□ -1.26
Col1a1P11087 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col1a1P11087 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Col1a1P11087 Gm29596-201ENSMUST00000185710 385 ntBASIC7.19□□□□□ -1.26
Col1a1P11087 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col1a1P11087 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col1a1P11087 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col1a1P11087 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col1a1P11087 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Col1a1P11087 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col1a1P11087 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col1a1P11087 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col1a1P11087 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col1a1P11087 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col1a1P11087 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC7.19□□□□□ -1.26
Col1a1P11087 Gm20819-201ENSMUST00000191091 925 ntBASIC7.19□□□□□ -1.26
Col1a1P11087 Gm20871-201ENSMUST00000191322 931 ntBASIC7.19□□□□□ -1.26
Col1a1P11087 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col1a1P11087 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col1a1P11087 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col1a1P11087 Gm43554-201ENSMUST00000199987 186 ntBASIC7.19□□□□□ -1.26
Col1a1P11087 Gm18705-201ENSMUST00000215985 913 ntBASIC7.19□□□□□ -1.26
Col1a1P11087 AC164302.1-201ENSMUST00000227036 433 ntBASIC7.19□□□□□ -1.26
Col1a1P11087 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC7.19□□□□□ -1.26
Col1a1P11087 Gm23737-201ENSMUST00000082547 159 ntBASIC7.19□□□□□ -1.26
Col1a1P11087 n-R5s173-201ENSMUST00000082620 119 ntBASIC7.19□□□□□ -1.26
Col1a1P11087 Gm24405-201ENSMUST00000083033 167 ntBASIC7.19□□□□□ -1.26
Col1a1P11087 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col1a1P11087 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Col1a1P11087 Gm43581-201ENSMUST00000196766 2864 ntBASIC7.19□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms