Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Chmp6P0C0A3 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Gm42994-201ENSMUST00000195964 2549 ntBASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Gm42992-201ENSMUST00000197043 6836 ntBASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Gm1966-201ENSMUST00000184540 7293 ntBASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Gm22952-201ENSMUST00000116720 120 ntBASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Gm14580-201ENSMUST00000119122 718 ntBASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Gm14098-201ENSMUST00000119295 623 ntBASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Gm13338-201ENSMUST00000120235 361 ntBASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Gm12140-201ENSMUST00000121214 544 ntBASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Chmp6P0C0A3 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Gm22235-201ENSMUST00000157085 110 ntBASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Gm25117-201ENSMUST00000157194 144 ntBASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Gm20530-201ENSMUST00000174261 254 ntBASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Gm18006-201ENSMUST00000177411 662 ntBASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Gm27998-201ENSMUST00000184902 361 ntBASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Gm38291-201ENSMUST00000193671 259 ntBASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Gm37477-201ENSMUST00000195215 884 ntBASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Igkv4-73-201ENSMUST00000199760 358 ntBASIC6.69□□□□□ -1.34
Chmp6P0C0A3 BC049739-201ENSMUST00000202626 660 ntBASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Gm44243-201ENSMUST00000204323 692 ntBASIC6.69□□□□□ -1.34
Chmp6P0C0A3 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Chmp6P0C0A3 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Gm45838-201ENSMUST00000207355 2447 ntBASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
Chmp6P0C0A3 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Gm37248-201ENSMUST00000193576 3174 ntBASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC6.69□□□□□ -1.34
Chmp6P0C0A3 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
Chmp6P0C0A3 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Chmp6P0C0A3 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
Chmp6P0C0A3 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Chmp6P0C0A3 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Chmp6P0C0A3 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Chmp6P0C0A3 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Chmp6P0C0A3 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC6.68□□□□□ -1.34
Chmp6P0C0A3 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Chmp6P0C0A3 Gm15300-201ENSMUST00000122324 279 ntBASIC6.68□□□□□ -1.34
Chmp6P0C0A3 Gm23903-201ENSMUST00000157566 131 ntBASIC6.68□□□□□ -1.34
Chmp6P0C0A3 Gm22311-201ENSMUST00000158006 110 ntBASIC6.68□□□□□ -1.34
Chmp6P0C0A3 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC6.68□□□□□ -1.34
Chmp6P0C0A3 Gm22701-201ENSMUST00000175371 291 ntBASIC6.68□□□□□ -1.34
Chmp6P0C0A3 Gm5947-201ENSMUST00000179156 714 ntBASIC6.68□□□□□ -1.34
Chmp6P0C0A3 n-R5s209-201ENSMUST00000179494 119 ntBASIC6.68□□□□□ -1.34
Chmp6P0C0A3 Gm5645-201ENSMUST00000179597 714 ntBASIC6.68□□□□□ -1.34
Chmp6P0C0A3 Gm4332-201ENSMUST00000196114 346 ntBASIC6.68□□□□□ -1.34
Chmp6P0C0A3 Gm43233-201ENSMUST00000200491 616 ntBASIC6.68□□□□□ -1.34
Chmp6P0C0A3 Gm18290-201ENSMUST00000202900 844 ntBASIC6.68□□□□□ -1.34
Chmp6P0C0A3 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC6.68□□□□□ -1.34
Chmp6P0C0A3 Gm5055-201ENSMUST00000215697 581 ntBASIC6.68□□□□□ -1.34
Chmp6P0C0A3 AC122290.1-201ENSMUST00000225631 1078 ntBASIC6.68□□□□□ -1.34
Chmp6P0C0A3 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC6.68□□□□□ -1.34
Chmp6P0C0A3 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Chmp6P0C0A3 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Chmp6P0C0A3 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Chmp6P0C0A3 Gm22581-201ENSMUST00000083735 136 ntBASIC6.68□□□□□ -1.34
Chmp6P0C0A3 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Chmp6P0C0A3 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Chmp6P0C0A3 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Chmp6P0C0A3 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Chmp6P0C0A3 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC6.68□□□□□ -1.34
Chmp6P0C0A3 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
Chmp6P0C0A3 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Chmp6P0C0A3 AC160029.1-201ENSMUST00000219628 2678 ntBASIC6.68□□□□□ -1.34
Chmp6P0C0A3 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Chmp6P0C0A3 Gm43469-201ENSMUST00000196084 4634 ntBASIC6.68□□□□□ -1.34
Chmp6P0C0A3 Gm37076-201ENSMUST00000192033 2294 ntBASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Gm45633-201ENSMUST00000210669 3253 ntBASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Gm45424-201ENSMUST00000210575 3300 ntBASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms