Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col4a1P02463 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Col4a1P02463 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Col4a1P02463 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col4a1P02463 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Col4a1P02463 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col4a1P02463 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Col4a1P02463 Gm38181-201ENSMUST00000181357 720 ntBASIC7.39□□□□□ -1.23
Col4a1P02463 Gm29159-201ENSMUST00000187969 379 ntBASIC7.39□□□□□ -1.23
Col4a1P02463 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC7.39□□□□□ -1.23
Col4a1P02463 Gm7890-201ENSMUST00000204877 601 ntBASIC7.39□□□□□ -1.23
Col4a1P02463 Gm31166-201ENSMUST00000209326 288 ntBASIC7.39□□□□□ -1.23
Col4a1P02463 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC7.39□□□□□ -1.23
Col4a1P02463 AL603745.1-201ENSMUST00000215473 532 ntBASIC7.39□□□□□ -1.23
Col4a1P02463 Gm19174-201ENSMUST00000216944 956 ntBASIC7.39□□□□□ -1.23
Col4a1P02463 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Col4a1P02463 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Col4a1P02463 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC7.39□□□□□ -1.23
Col4a1P02463 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Col4a1P02463 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col4a1P02463 Golgb1-202ENSMUST00000039855 10847 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
Col4a1P02463 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col4a1P02463 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col4a1P02463 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col4a1P02463 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Col4a1P02463 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Col4a1P02463 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col4a1P02463 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Col4a1P02463 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC7.39□□□□□ -1.23
Col4a1P02463 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Col4a1P02463 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC7.39□□□□□ -1.23
Col4a1P02463 Gm37221-201ENSMUST00000194472 3007 ntBASIC7.39□□□□□ -1.23
Col4a1P02463 Gm37206-201ENSMUST00000195512 3069 ntBASIC7.39□□□□□ -1.23
Col4a1P02463 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Col4a1P02463 Ryr1-208ENSMUST00000214374 15300 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Col4a1P02463 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Col4a1P02463 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Col4a1P02463 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Col4a1P02463 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col4a1P02463 Gm13338-201ENSMUST00000120235 361 ntBASIC7.38□□□□□ -1.23
Col4a1P02463 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC7.38□□□□□ -1.23
Col4a1P02463 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC7.38□□□□□ -1.23
Col4a1P02463 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC7.38□□□□□ -1.23
Col4a1P02463 Gm27985-201ENSMUST00000185112 378 ntBASIC7.38□□□□□ -1.23
Col4a1P02463 Gm28443-201ENSMUST00000189081 698 ntBASIC7.38□□□□□ -1.23
Col4a1P02463 Gm28507-201ENSMUST00000189737 703 ntBASIC7.38□□□□□ -1.23
Col4a1P02463 Gm28640-201ENSMUST00000190918 550 ntBASIC7.38□□□□□ -1.23
Col4a1P02463 Gm43148-201ENSMUST00000198237 520 ntBASIC7.38□□□□□ -1.23
Col4a1P02463 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC7.38□□□□□ -1.23
Col4a1P02463 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC7.38□□□□□ -1.23
Col4a1P02463 Gm4032-201ENSMUST00000210886 487 ntBASIC7.38□□□□□ -1.23
Col4a1P02463 Gm18850-201ENSMUST00000211578 388 ntBASIC7.38□□□□□ -1.23
Col4a1P02463 Gm5087-204ENSMUST00000225820 645 ntBASIC7.38□□□□□ -1.23
Col4a1P02463 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC7.38□□□□□ -1.23
Col4a1P02463 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Col4a1P02463 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col4a1P02463 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Col4a1P02463 Gm9894-201ENSMUST00000171257 2904 ntBASIC7.38□□□□□ -1.23
Col4a1P02463 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col4a1P02463 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col4a1P02463 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Col4a1P02463 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
Col4a1P02463 Mbnl3-202ENSMUST00000114875 4649 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Col4a1P02463 Specc1-207ENSMUST00000201364 4955 ntAPPRIS P4 TSL 5 BASIC7.38□□□□□ -1.23
Col4a1P02463 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Col4a1P02463 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Col4a1P02463 Fmo5-203ENSMUST00000107050 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col4a1P02463 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC7.38□□□□□ -1.23
Col4a1P02463 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col4a1P02463 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col4a1P02463 Kat6b-209ENSMUST00000182964 7699 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Col4a1P02463 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col4a1P02463 Tecta-203ENSMUST00000160940 7048 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Col4a1P02463 Klhl32-203ENSMUST00000108214 5970 ntTSL 5 BASIC7.38□□□□□ -1.23
Col4a1P02463 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
Col4a1P02463 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col4a1P02463 Itsn1-208ENSMUST00000114002 14012 ntAPPRIS P2 TSL 5 BASIC7.38□□□□□ -1.23
Col4a1P02463 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC7.38□□□□□ -1.23
Col4a1P02463 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Col4a1P02463 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Col4a1P02463 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Col4a1P02463 Gm22596-201ENSMUST00000157601 316 ntBASIC7.38□□□□□ -1.23
Col4a1P02463 Ear-ps5-201ENSMUST00000164700 463 ntBASIC7.38□□□□□ -1.23
Col4a1P02463 Gm884-202ENSMUST00000167262 4576 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Col4a1P02463 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC7.38□□□□□ -1.23
Col4a1P02463 Gm23799-201ENSMUST00000175559 120 ntBASIC7.38□□□□□ -1.23
Col4a1P02463 Gm28061-201ENSMUST00000189085 807 ntBASIC7.38□□□□□ -1.23
Col4a1P02463 Gm36936-201ENSMUST00000194508 2749 ntBASIC7.38□□□□□ -1.23
Col4a1P02463 Gm43779-201ENSMUST00000196691 829 ntBASIC7.38□□□□□ -1.23
Col4a1P02463 Gm43745-201ENSMUST00000198085 1883 ntBASIC7.38□□□□□ -1.23
Col4a1P02463 Gm5554-201ENSMUST00000199726 1206 ntBASIC7.38□□□□□ -1.23
Col4a1P02463 Gm42989-201ENSMUST00000200646 2306 ntBASIC7.38□□□□□ -1.23
Col4a1P02463 Gm5418-201ENSMUST00000206932 528 ntBASIC7.38□□□□□ -1.23
Col4a1P02463 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC7.38□□□□□ -1.23
Col4a1P02463 Gm45562-201ENSMUST00000210015 1537 ntBASIC7.38□□□□□ -1.23
Col4a1P02463 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC7.38□□□□□ -1.23
Col4a1P02463 Gm36501-201ENSMUST00000221857 745 ntBASIC7.38□□□□□ -1.23
Col4a1P02463 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC7.38□□□□□ -1.23
Col4a1P02463 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Col4a1P02463 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms