Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Hmgb3O54879 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Hmgb3O54879 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Hmgb3O54879 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC4.93□□□□□ -1.62
Hmgb3O54879 Gm4202-201ENSMUST00000169025 733 ntBASIC4.93□□□□□ -1.62
Hmgb3O54879 Rsph10b-204ENSMUST00000169758 702 ntTSL 5 BASIC4.93□□□□□ -1.62
Hmgb3O54879 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Hmgb3O54879 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Hmgb3O54879 Gm26812-201ENSMUST00000181647 328 ntTSL 3 BASIC4.93□□□□□ -1.62
Hmgb3O54879 Gm27360-201ENSMUST00000183487 80 ntBASIC4.93□□□□□ -1.62
Hmgb3O54879 Gm28006-201ENSMUST00000183841 122 ntBASIC4.93□□□□□ -1.62
Hmgb3O54879 Gm28580-201ENSMUST00000186767 88 ntBASIC4.93□□□□□ -1.62
Hmgb3O54879 Gm18447-201ENSMUST00000187501 307 ntBASIC4.93□□□□□ -1.62
Hmgb3O54879 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC4.93□□□□□ -1.62
Hmgb3O54879 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC4.93□□□□□ -1.62
Hmgb3O54879 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Hmgb3O54879 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC4.93□□□□□ -1.62
Hmgb3O54879 Gm22149-202ENSMUST00000196259 137 ntBASIC4.93□□□□□ -1.62
Hmgb3O54879 Gm42782-201ENSMUST00000197286 522 ntBASIC4.93□□□□□ -1.62
Hmgb3O54879 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Hmgb3O54879 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC4.93□□□□□ -1.62
Hmgb3O54879 Gm5586-201ENSMUST00000206264 795 ntBASIC4.93□□□□□ -1.62
Hmgb3O54879 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Hmgb3O54879 AC164550.1-201ENSMUST00000217821 1066 ntBASIC4.93□□□□□ -1.62
Hmgb3O54879 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Hmgb3O54879 CT030260.1-201ENSMUST00000223243 442 ntBASIC4.93□□□□□ -1.62
Hmgb3O54879 AC165287.1-201ENSMUST00000224985 178 ntBASIC4.93□□□□□ -1.62
Hmgb3O54879 AC124395.1-201ENSMUST00000225940 707 ntBASIC4.93□□□□□ -1.62
Hmgb3O54879 AC154806.5-205ENSMUST00000228828 411 ntBASIC4.93□□□□□ -1.62
Hmgb3O54879 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Hmgb3O54879 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Hmgb3O54879 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Hmgb3O54879 Gm7808-201ENSMUST00000082002 387 ntBASIC4.93□□□□□ -1.62
Hmgb3O54879 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Hmgb3O54879 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Hmgb3O54879 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Hmgb3O54879 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC4.93□□□□□ -1.62
Hmgb3O54879 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Hmgb3O54879 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Hmgb3O54879 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Hmgb3O54879 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Hmgb3O54879 Gm44895-201ENSMUST00000206670 1538 ntBASIC4.92□□□□□ -1.62
Hmgb3O54879 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC4.92□□□□□ -1.62
Hmgb3O54879 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC4.92□□□□□ -1.62
Hmgb3O54879 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC4.92□□□□□ -1.62
Hmgb3O54879 Gm42798-201ENSMUST00000200853 3972 ntBASIC4.92□□□□□ -1.62
Hmgb3O54879 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Hmgb3O54879 CT009757.4-201ENSMUST00000221520 2541 ntBASIC4.92□□□□□ -1.62
Hmgb3O54879 AC122769.3-201ENSMUST00000227739 3245 ntBASIC4.92□□□□□ -1.62
Hmgb3O54879 Gm44822-201ENSMUST00000208559 6389 ntBASIC4.92□□□□□ -1.62
Hmgb3O54879 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Hmgb3O54879 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Hmgb3O54879 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Hmgb3O54879 Gm26422-201ENSMUST00000104276 132 ntBASIC4.92□□□□□ -1.62
Hmgb3O54879 Tmsb4x-203ENSMUST00000112176 698 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Hmgb3O54879 Gm11501-201ENSMUST00000118039 581 ntBASIC4.92□□□□□ -1.62
Hmgb3O54879 Gm13744-201ENSMUST00000118953 850 ntBASIC4.92□□□□□ -1.62
Hmgb3O54879 Gm14998-201ENSMUST00000120502 495 ntBASIC4.92□□□□□ -1.62
Hmgb3O54879 Gm15152-201ENSMUST00000121540 394 ntBASIC4.92□□□□□ -1.62
Hmgb3O54879 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC4.92□□□□□ -1.62
Hmgb3O54879 Gm10364-202ENSMUST00000153034 1001 ntBASIC4.92□□□□□ -1.62
Hmgb3O54879 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC4.92□□□□□ -1.62
Hmgb3O54879 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Hmgb3O54879 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Hmgb3O54879 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Hmgb3O54879 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Hmgb3O54879 Gm27299-201ENSMUST00000184593 103 ntBASIC4.92□□□□□ -1.62
Hmgb3O54879 Gm27596-201ENSMUST00000185061 83 ntBASIC4.92□□□□□ -1.62
Hmgb3O54879 Gm29111-201ENSMUST00000188823 696 ntBASIC4.92□□□□□ -1.62
Hmgb3O54879 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Hmgb3O54879 Gm28584-201ENSMUST00000191489 696 ntBASIC4.92□□□□□ -1.62
Hmgb3O54879 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Hmgb3O54879 Gm38138-201ENSMUST00000193274 696 ntBASIC4.92□□□□□ -1.62
Hmgb3O54879 Gm37991-201ENSMUST00000194297 696 ntBASIC4.92□□□□□ -1.62
Hmgb3O54879 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Hmgb3O54879 Gm43561-201ENSMUST00000199866 448 ntBASIC4.92□□□□□ -1.62
Hmgb3O54879 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Hmgb3O54879 Gm44411-201ENSMUST00000204172 349 ntBASIC4.92□□□□□ -1.62
Hmgb3O54879 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC4.92□□□□□ -1.62
Hmgb3O54879 Gm18012-201ENSMUST00000204558 773 ntBASIC4.92□□□□□ -1.62
Hmgb3O54879 A730082K24Rik-202ENSMUST00000205795 658 ntTSL 3 BASIC4.92□□□□□ -1.62
Hmgb3O54879 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC4.92□□□□□ -1.62
Hmgb3O54879 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC4.92□□□□□ -1.62
Hmgb3O54879 AC154861.1-201ENSMUST00000223767 800 ntBASIC4.92□□□□□ -1.62
Hmgb3O54879 Gm25189-201ENSMUST00000083911 164 ntBASIC4.92□□□□□ -1.62
Hmgb3O54879 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Hmgb3O54879 CT025686.2-201ENSMUST00000227898 3315 ntBASIC4.92□□□□□ -1.62
Hmgb3O54879 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC4.92□□□□□ -1.62
Hmgb3O54879 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Hmgb3O54879 Gm11342-203ENSMUST00000224879 1324 ntBASIC4.92□□□□□ -1.62
Hmgb3O54879 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
Hmgb3O54879 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
Hmgb3O54879 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Hmgb3O54879 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Hmgb3O54879 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Hmgb3O54879 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC4.91□□□□□ -1.62
Hmgb3O54879 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Hmgb3O54879 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
Hmgb3O54879 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Hmgb3O54879 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms