Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 Gm29435-201ENSMUST00000191310 689 ntBASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 Gm37054-201ENSMUST00000193481 543 ntBASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 Gm18877-201ENSMUST00000207706 539 ntBASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 Gm4548-201ENSMUST00000208487 509 ntBASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 Gm44909-201ENSMUST00000208756 165 ntBASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 Gm4270-201ENSMUST00000209666 406 ntBASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 Gm2099-201ENSMUST00000220979 412 ntBASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 AC091783.3-201ENSMUST00000223969 681 ntBASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 CT025603.4-201ENSMUST00000225777 413 ntBASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 CT030662.1-201ENSMUST00000227380 232 ntBASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 AC125087.1-201ENSMUST00000227552 514 ntBASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 AC121114.1-201ENSMUST00000228522 570 ntBASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 4930556J24Rik-201ENSMUST00000042344 1220 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 n-R5s196-201ENSMUST00000083136 117 ntBASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 Gm5446-201ENSMUST00000091762 784 ntBASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 Gm14280-201ENSMUST00000138080 1444 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 Gm43864-201ENSMUST00000204452 4028 ntBASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 Gm43953-201ENSMUST00000203709 2867 ntBASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 Gm43425-201ENSMUST00000201793 3291 ntBASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 Gm43319-201ENSMUST00000198036 2270 ntBASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 Gm43229-201ENSMUST00000201812 1850 ntBASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdh1F7BJK1 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Pcdh1F7BJK1 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Pcdh1F7BJK1 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
Pcdh1F7BJK1 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC6.21□□□□□ -1.41
Pcdh1F7BJK1 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Pcdh1F7BJK1 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Pcdh1F7BJK1 Gm18830-201ENSMUST00000199036 1396 ntBASIC6.21□□□□□ -1.41
Pcdh1F7BJK1 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC6.21□□□□□ -1.41
Pcdh1F7BJK1 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Pcdh1F7BJK1 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Pcdh1F7BJK1 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Gm19176-201ENSMUST00000222149 1831 ntBASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Gm25647-201ENSMUST00000101832 78 ntBASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Gm25823-201ENSMUST00000101995 78 ntBASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Mir582-201ENSMUST00000103758 81 ntBASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Gm12889-201ENSMUST00000118684 241 ntBASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Gm12944-201ENSMUST00000119262 463 ntBASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Gm5387-201ENSMUST00000119776 857 ntBASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Gm11990-201ENSMUST00000121505 897 ntBASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Gm11575-201ENSMUST00000122243 228 ntBASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Gm24220-201ENSMUST00000177753 79 ntBASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Gm25988-201ENSMUST00000177759 79 ntBASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Gm23471-201ENSMUST00000177886 79 ntBASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Gm26488-201ENSMUST00000178225 79 ntBASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Gm4956-202ENSMUST00000178869 672 ntBASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Gm23449-201ENSMUST00000179208 79 ntBASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Gm25221-201ENSMUST00000180051 79 ntBASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Gm26812-201ENSMUST00000181647 328 ntTSL 3 BASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Mir8094-201ENSMUST00000183361 117 ntBASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Gm27401-201ENSMUST00000184052 173 ntBASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Gm8101-201ENSMUST00000192796 478 ntBASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Gm38079-201ENSMUST00000195603 154 ntBASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Gm43308-201ENSMUST00000197236 373 ntBASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Klra13-ps-203ENSMUST00000204367 850 ntBASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Gm18484-201ENSMUST00000204389 991 ntBASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Gm44118-201ENSMUST00000204665 229 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 106.8 ms