Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Srp54bE9PXC0 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Srp54bE9PXC0 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Srp54bE9PXC0 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Srp54bE9PXC0 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
Srp54bE9PXC0 Gm37913-201ENSMUST00000192925 2544 ntBASIC6.25□□□□□ -1.41
Srp54bE9PXC0 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Srp54bE9PXC0 AC163032.1-201ENSMUST00000220671 2970 ntBASIC6.24□□□□□ -1.41
Srp54bE9PXC0 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Srp54bE9PXC0 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Srp54bE9PXC0 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Srp54bE9PXC0 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Srp54bE9PXC0 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Srp54bE9PXC0 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Srp54bE9PXC0 Gm14158-201ENSMUST00000118409 308 ntBASIC6.24□□□□□ -1.41
Srp54bE9PXC0 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC6.24□□□□□ -1.41
Srp54bE9PXC0 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC6.24□□□□□ -1.41
Srp54bE9PXC0 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Srp54bE9PXC0 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC6.24□□□□□ -1.41
Srp54bE9PXC0 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC6.24□□□□□ -1.41
Srp54bE9PXC0 Gm24733-201ENSMUST00000158863 253 ntBASIC6.24□□□□□ -1.41
Srp54bE9PXC0 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC6.24□□□□□ -1.41
Srp54bE9PXC0 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Srp54bE9PXC0 Gm20778-201ENSMUST00000178524 627 ntBASIC6.24□□□□□ -1.41
Srp54bE9PXC0 Gm8506-201ENSMUST00000186661 829 ntBASIC6.24□□□□□ -1.41
Srp54bE9PXC0 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Srp54bE9PXC0 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Srp54bE9PXC0 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Srp54bE9PXC0 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC6.24□□□□□ -1.41
Srp54bE9PXC0 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC6.24□□□□□ -1.41
Srp54bE9PXC0 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Srp54bE9PXC0 Gm45473-201ENSMUST00000211452 616 ntBASIC6.24□□□□□ -1.41
Srp54bE9PXC0 Gm45734-201ENSMUST00000211916 411 ntBASIC6.24□□□□□ -1.41
Srp54bE9PXC0 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC6.24□□□□□ -1.41
Srp54bE9PXC0 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC6.24□□□□□ -1.41
Srp54bE9PXC0 Thoc7-209ENSMUST00000225325 765 ntBASIC6.24□□□□□ -1.41
Srp54bE9PXC0 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Srp54bE9PXC0 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Srp54bE9PXC0 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC6.24□□□□□ -1.41
Srp54bE9PXC0 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC6.24□□□□□ -1.41
Srp54bE9PXC0 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Srp54bE9PXC0 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Srp54bE9PXC0 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Srp54bE9PXC0 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Srp54bE9PXC0 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.24□□□□□ -1.41
Srp54bE9PXC0 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Srp54bE9PXC0 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Srp54bE9PXC0 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Srp54bE9PXC0 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Srp54bE9PXC0 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Srp54bE9PXC0 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Srp54bE9PXC0 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Gm12643-201ENSMUST00000116078 374 ntBASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Gm12937-201ENSMUST00000118333 448 ntBASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Gm15366-201ENSMUST00000118433 1019 ntBASIC6.23□□□□□ -1.41
Srp54bE9PXC0 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Gm13604-201ENSMUST00000119332 482 ntBASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Gm13207-201ENSMUST00000119862 773 ntBASIC6.23□□□□□ -1.41
Srp54bE9PXC0 M6pr-ps-201ENSMUST00000120481 830 ntBASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Gm22094-201ENSMUST00000158976 117 ntBASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Gm15257-201ENSMUST00000177680 883 ntBASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Gm15252-201ENSMUST00000177750 883 ntBASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Gm15256-201ENSMUST00000177793 883 ntBASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Gm15260-201ENSMUST00000179402 883 ntBASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Gm26923-201ENSMUST00000182615 996 ntBASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Mir6361-201ENSMUST00000185079 101 ntBASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Gm43501-201ENSMUST00000202513 107 ntBASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Gm44239-201ENSMUST00000204228 271 ntBASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Gm9685-201ENSMUST00000211275 538 ntBASIC6.23□□□□□ -1.41
Srp54bE9PXC0 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Srp54bE9PXC0 AC122371.2-201ENSMUST00000220583 366 ntBASIC6.23□□□□□ -1.41
Srp54bE9PXC0 AC139568.1-201ENSMUST00000222878 486 ntBASIC6.23□□□□□ -1.41
Srp54bE9PXC0 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Srp54bE9PXC0 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Gm28392-201ENSMUST00000077630 393 ntBASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Srp54bE9PXC0 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms