Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Scn3aA2ASI5 Gm26984-201ENSMUST00000182345 3510 ntBASIC6.81□□□□□ -1.32
Scn3aA2ASI5 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Scn3aA2ASI5 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Scn3aA2ASI5 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
Scn3aA2ASI5 Gm11990-201ENSMUST00000121505 897 ntBASIC6.8□□□□□ -1.32
Scn3aA2ASI5 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC6.8□□□□□ -1.32
Scn3aA2ASI5 Gm23149-201ENSMUST00000158837 230 ntBASIC6.8□□□□□ -1.32
Scn3aA2ASI5 Gm16139-201ENSMUST00000160015 420 ntBASIC6.8□□□□□ -1.32
Scn3aA2ASI5 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC6.8□□□□□ -1.32
Scn3aA2ASI5 Gm6472-201ENSMUST00000178147 651 ntBASIC6.8□□□□□ -1.32
Scn3aA2ASI5 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC6.8□□□□□ -1.32
Scn3aA2ASI5 Gm42961-201ENSMUST00000202023 181 ntBASIC6.8□□□□□ -1.32
Scn3aA2ASI5 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Scn3aA2ASI5 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC6.8□□□□□ -1.32
Scn3aA2ASI5 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Scn3aA2ASI5 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Scn3aA2ASI5 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Scn3aA2ASI5 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Scn3aA2ASI5 Gm5436-201ENSMUST00000058103 643 ntBASIC6.8□□□□□ -1.32
Scn3aA2ASI5 Mir375-201ENSMUST00000083682 64 ntBASIC6.8□□□□□ -1.32
Scn3aA2ASI5 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Scn3aA2ASI5 Gm7155-201ENSMUST00000121143 1671 ntBASIC6.8□□□□□ -1.32
Scn3aA2ASI5 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Scn3aA2ASI5 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC6.8□□□□□ -1.32
Scn3aA2ASI5 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Scn3aA2ASI5 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Scn3aA2ASI5 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Scn3aA2ASI5 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC6.8□□□□□ -1.32
Scn3aA2ASI5 AC159308.1-201ENSMUST00000216615 1351 ntBASIC6.8□□□□□ -1.32
Scn3aA2ASI5 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC6.8□□□□□ -1.32
Scn3aA2ASI5 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Scn3aA2ASI5 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Scn3aA2ASI5 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Scn3aA2ASI5 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Scn3aA2ASI5 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC6.8□□□□□ -1.32
Scn3aA2ASI5 Gm24731-201ENSMUST00000158227 131 ntBASIC6.8□□□□□ -1.32
Scn3aA2ASI5 Gm37358-201ENSMUST00000195492 479 ntBASIC6.8□□□□□ -1.32
Scn3aA2ASI5 Gm44494-201ENSMUST00000196760 129 ntBASIC6.8□□□□□ -1.32
Scn3aA2ASI5 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC6.8□□□□□ -1.32
Scn3aA2ASI5 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
Scn3aA2ASI5 AC132384.3-201ENSMUST00000219709 472 ntBASIC6.8□□□□□ -1.32
Scn3aA2ASI5 AC161586.1-201ENSMUST00000223232 547 ntBASIC6.8□□□□□ -1.32
Scn3aA2ASI5 AC164302.1-201ENSMUST00000227036 433 ntBASIC6.8□□□□□ -1.32
Scn3aA2ASI5 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Scn3aA2ASI5 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Scn3aA2ASI5 Gm23737-201ENSMUST00000082547 159 ntBASIC6.8□□□□□ -1.32
Scn3aA2ASI5 Mir143-201ENSMUST00000083511 63 ntBASIC6.8□□□□□ -1.32
Scn3aA2ASI5 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Scn3aA2ASI5 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Scn3aA2ASI5 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Scn3aA2ASI5 Gm8750-201ENSMUST00000173278 1537 ntBASIC6.79□□□□□ -1.32
Scn3aA2ASI5 AC153143.1-201ENSMUST00000222966 1340 ntBASIC6.79□□□□□ -1.32
Scn3aA2ASI5 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Scn3aA2ASI5 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Scn3aA2ASI5 Abcb11-204ENSMUST00000180142 4963 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Scn3aA2ASI5 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC6.79□□□□□ -1.32
Scn3aA2ASI5 Gm45786-201ENSMUST00000213021 2278 ntBASIC6.79□□□□□ -1.32
Scn3aA2ASI5 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Scn3aA2ASI5 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Scn3aA2ASI5 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
Scn3aA2ASI5 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Scn3aA2ASI5 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC6.79□□□□□ -1.32
Scn3aA2ASI5 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC6.79□□□□□ -1.32
Scn3aA2ASI5 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Scn3aA2ASI5 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Scn3aA2ASI5 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Scn3aA2ASI5 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Scn3aA2ASI5 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Scn3aA2ASI5 Gm27006-201ENSMUST00000182218 943 ntBASIC6.79□□□□□ -1.32
Scn3aA2ASI5 Gm44219-201ENSMUST00000203005 273 ntBASIC6.79□□□□□ -1.32
Scn3aA2ASI5 Gm44984-201ENSMUST00000207802 394 ntBASIC6.79□□□□□ -1.32
Scn3aA2ASI5 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC6.79□□□□□ -1.32
Scn3aA2ASI5 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC6.79□□□□□ -1.32
Scn3aA2ASI5 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Scn3aA2ASI5 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC6.79□□□□□ -1.32
Scn3aA2ASI5 n-R5s69-201ENSMUST00000083872 119 ntBASIC6.79□□□□□ -1.32
Scn3aA2ASI5 Gm24029-201ENSMUST00000083928 143 ntBASIC6.79□□□□□ -1.32
Scn3aA2ASI5 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Scn3aA2ASI5 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC6.79□□□□□ -1.32
Scn3aA2ASI5 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Scn3aA2ASI5 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Scn3aA2ASI5 AC153959.1-201ENSMUST00000213617 1694 ntBASIC6.79□□□□□ -1.32
Scn3aA2ASI5 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC6.79□□□□□ -1.32
Scn3aA2ASI5 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Scn3aA2ASI5 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
Scn3aA2ASI5 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Scn3aA2ASI5 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC6.78□□□□□ -1.32
Scn3aA2ASI5 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Scn3aA2ASI5 Gm37221-201ENSMUST00000194472 3007 ntBASIC6.78□□□□□ -1.32
Scn3aA2ASI5 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC6.78□□□□□ -1.32
Scn3aA2ASI5 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Scn3aA2ASI5 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Scn3aA2ASI5 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Scn3aA2ASI5 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Scn3aA2ASI5 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Scn3aA2ASI5 Gm26067-201ENSMUST00000103789 110 ntBASIC6.78□□□□□ -1.32
Scn3aA2ASI5 Gm15040-201ENSMUST00000118561 1241 ntBASIC6.78□□□□□ -1.32
Scn3aA2ASI5 Gm15331-201ENSMUST00000120225 385 ntBASIC6.78□□□□□ -1.32
Scn3aA2ASI5 Gm12494-201ENSMUST00000121684 521 ntBASIC6.78□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms