Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Paqr5-202ENSMUST00000113990 1073 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Gm12102-201ENSMUST00000118251 604 ntBASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Gm14293-201ENSMUST00000118528 577 ntBASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Gm15186-201ENSMUST00000119345 563 ntBASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Gm13680-201ENSMUST00000119790 793 ntBASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Gm14515-201ENSMUST00000121327 216 ntBASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Gm13471-201ENSMUST00000122057 433 ntBASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Gm15111-201ENSMUST00000122142 878 ntBASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Gm28560-201ENSMUST00000186091 315 ntBASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Gm28334-201ENSMUST00000186653 315 ntBASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Gm28495-201ENSMUST00000188452 315 ntBASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Gm28232-201ENSMUST00000188683 315 ntBASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Gm28481-201ENSMUST00000189231 315 ntBASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Gm18797-201ENSMUST00000190809 1174 ntBASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Gm29059-201ENSMUST00000191534 315 ntBASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Gm37765-201ENSMUST00000192395 315 ntBASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Gm37237-201ENSMUST00000192893 315 ntBASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Gm36968-201ENSMUST00000193737 315 ntBASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Gm38290-201ENSMUST00000195238 315 ntBASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Gm38328-201ENSMUST00000195582 317 ntBASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Gm36667-201ENSMUST00000196125 753 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Gm42977-201ENSMUST00000197497 144 ntBASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Gm33096-201ENSMUST00000210189 493 ntBASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Gm45388-202ENSMUST00000211101 815 ntTSL 5 BASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Gm35501-201ENSMUST00000213492 783 ntTSL 2 BASIC6.98□□□□□ -1.29
Trim39Q9ESN2 AC155934.1-201ENSMUST00000213802 322 ntTSL 5 BASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Gm18655-201ENSMUST00000214802 1090 ntBASIC6.98□□□□□ -1.29
Trim39Q9ESN2 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Gm46192-201ENSMUST00000217894 326 ntBASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Gm9110-201ENSMUST00000219035 617 ntBASIC6.98□□□□□ -1.29
Trim39Q9ESN2 AC123920.1-201ENSMUST00000221449 384 ntBASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Gm19011-201ENSMUST00000221777 808 ntBASIC6.98□□□□□ -1.29
Trim39Q9ESN2 AC133203.2-201ENSMUST00000226709 464 ntBASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Slurp1-201ENSMUST00000023261 567 ntTSL 5 BASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Vpreb2-201ENSMUST00000075371 429 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Mir484-201ENSMUST00000093566 67 ntBASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Ifna4-201ENSMUST00000094973 561 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Olfr75-ps1-202ENSMUST00000141956 2500 ntTSL 2 BASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Gm43623-201ENSMUST00000199289 2663 ntBASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Trim39Q9ESN2 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Pnlip-201ENSMUST00000057270 1485 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Fam83b-202ENSMUST00000183437 3879 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trim39Q9ESN2 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm37548-201ENSMUST00000194519 3814 ntBASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm3555-201ENSMUST00000160287 1395 ntBASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm10650-202ENSMUST00000196581 1969 ntBASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm38009-201ENSMUST00000194884 3341 ntBASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Uqcrq-202ENSMUST00000109019 504 ntTSL 2 BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm13526-201ENSMUST00000117970 189 ntBASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm12959-201ENSMUST00000119396 403 ntBASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC6.97□□□□□ -1.29
Trim39Q9ESN2 M6pr-ps-201ENSMUST00000120481 830 ntBASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm13555-201ENSMUST00000121668 319 ntBASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm15367-201ENSMUST00000122398 1016 ntBASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm25780-201ENSMUST00000122528 253 ntBASIC6.97□□□□□ -1.29
Trim39Q9ESN2 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm13068-202ENSMUST00000146250 876 ntTSL 3 BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Mir1968-201ENSMUST00000157429 68 ntBASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm25669-201ENSMUST00000157699 112 ntBASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm2108-201ENSMUST00000165058 2177 ntBASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm17155-201ENSMUST00000165969 473 ntBASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Trav9n-3-201ENSMUST00000177705 575 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Trav9d-3-201ENSMUST00000178252 575 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm8307-201ENSMUST00000187682 1150 ntBASIC6.97□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms