Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.01□□□□□ -1.45
Lima1Q9ERG0 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Gm25415-201ENSMUST00000104220 132 ntBASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Gm10936-201ENSMUST00000105264 252 ntBASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Gm22103-201ENSMUST00000116733 121 ntBASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Gm26475-201ENSMUST00000116769 121 ntBASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Gm23620-201ENSMUST00000116812 121 ntBASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Gm25042-201ENSMUST00000116856 121 ntBASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Gm25540-201ENSMUST00000116880 121 ntBASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Gm13193-201ENSMUST00000117275 225 ntBASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Gm14098-201ENSMUST00000119295 623 ntBASIC6.01□□□□□ -1.45
Lima1Q9ERG0 n-R5s201-201ENSMUST00000122622 116 ntBASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Gm23550-201ENSMUST00000179003 121 ntBASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Gm25123-201ENSMUST00000179154 121 ntBASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Gm25353-201ENSMUST00000179366 121 ntBASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Gm22992-201ENSMUST00000179496 121 ntBASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Gm25892-201ENSMUST00000179867 121 ntBASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Gm24092-201ENSMUST00000180257 121 ntBASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Gm29385-201ENSMUST00000186831 363 ntBASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Gm43048-201ENSMUST00000196101 388 ntBASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC6.01□□□□□ -1.45
Lima1Q9ERG0 AC163667.1-201ENSMUST00000225201 1289 ntBASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Gm45413-201ENSMUST00000210389 3538 ntBASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Gm43981-201ENSMUST00000203285 1467 ntBASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Lima1Q9ERG0 AC159896.3-201ENSMUST00000215904 3835 ntBASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Lima1Q9ERG0 AC132465.1-201ENSMUST00000219938 1307 ntBASIC6□□□□□ -1.45
Lima1Q9ERG0 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Lima1Q9ERG0 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Lima1Q9ERG0 Gm42510-201ENSMUST00000196470 2258 ntBASIC6□□□□□ -1.45
Lima1Q9ERG0 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Lima1Q9ERG0 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC6□□□□□ -1.45
Lima1Q9ERG0 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC6□□□□□ -1.45
Lima1Q9ERG0 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC6□□□□□ -1.45
Lima1Q9ERG0 Gm15016-201ENSMUST00000117300 720 ntBASIC6□□□□□ -1.45
Lima1Q9ERG0 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC6□□□□□ -1.45
Lima1Q9ERG0 Gm14863-201ENSMUST00000119648 307 ntBASIC6□□□□□ -1.45
Lima1Q9ERG0 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC6□□□□□ -1.45
Lima1Q9ERG0 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC6□□□□□ -1.45
Lima1Q9ERG0 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC6□□□□□ -1.45
Lima1Q9ERG0 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC6□□□□□ -1.45
Lima1Q9ERG0 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC6□□□□□ -1.45
Lima1Q9ERG0 Gm22711-202ENSMUST00000197029 135 ntBASIC6□□□□□ -1.45
Lima1Q9ERG0 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC6□□□□□ -1.45
Lima1Q9ERG0 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC6□□□□□ -1.45
Lima1Q9ERG0 Gm19324-201ENSMUST00000213229 1169 ntBASIC6□□□□□ -1.45
Lima1Q9ERG0 AC135353.1-201ENSMUST00000215330 630 ntBASIC6□□□□□ -1.45
Lima1Q9ERG0 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Lima1Q9ERG0 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC6□□□□□ -1.45
Lima1Q9ERG0 AC154861.1-201ENSMUST00000223767 800 ntBASIC6□□□□□ -1.45
Lima1Q9ERG0 AC114008.1-201ENSMUST00000226193 937 ntBASIC6□□□□□ -1.45
Lima1Q9ERG0 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC6□□□□□ -1.45
Lima1Q9ERG0 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC6□□□□□ -1.45
Lima1Q9ERG0 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC6□□□□□ -1.45
Lima1Q9ERG0 Gm24695-201ENSMUST00000083877 83 ntBASIC6□□□□□ -1.45
Lima1Q9ERG0 Gm10205-201ENSMUST00000087431 234 ntBASIC6□□□□□ -1.45
Lima1Q9ERG0 Gm29486-201ENSMUST00000088648 372 ntBASIC6□□□□□ -1.45
Lima1Q9ERG0 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Lima1Q9ERG0 AC140393.3-201ENSMUST00000228396 1352 ntBASIC6□□□□□ -1.45
Lima1Q9ERG0 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Lima1Q9ERG0 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC6□□□□□ -1.45
Lima1Q9ERG0 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC6□□□□□ -1.45
Lima1Q9ERG0 Gm18066-201ENSMUST00000210904 1774 ntBASIC6□□□□□ -1.45
Lima1Q9ERG0 Gm37897-201ENSMUST00000192613 3561 ntBASIC6□□□□□ -1.45
Lima1Q9ERG0 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Gm37238-201ENSMUST00000195552 2390 ntBASIC5.99□□□□□ -1.45
Lima1Q9ERG0 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Gm11462-201ENSMUST00000117749 562 ntBASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Gm12804-201ENSMUST00000121030 999 ntBASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Gm5843-201ENSMUST00000121631 476 ntBASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms