Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm9521-201ENSMUST00000206656 1516 ntBASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 AC156025.2-201ENSMUST00000225907 1533 ntBASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 Gm38377-201ENSMUST00000193253 3772 ntBASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 Gm12115-201ENSMUST00000119969 447 ntBASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 Gm13438-201ENSMUST00000120100 573 ntBASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 Gm6446-201ENSMUST00000120604 818 ntBASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 Gm15618-201ENSMUST00000121610 452 ntBASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 Gm25962-201ENSMUST00000157173 168 ntBASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 Gm22311-201ENSMUST00000158006 110 ntBASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 Gm24359-201ENSMUST00000158418 221 ntBASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 Gm38291-201ENSMUST00000193671 259 ntBASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 Gm18839-201ENSMUST00000204292 670 ntBASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 AC165292.1-201ENSMUST00000215218 620 ntBASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 AC154642.1-201ENSMUST00000224173 740 ntBASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 n-R5s180-201ENSMUST00000082770 106 ntBASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 Gm38322-201ENSMUST00000194074 2300 ntBASIC6.4□□□□□ -1.38
Chmp2aQ9DB34 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Chmp2aQ9DB34 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
Chmp2aQ9DB34 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Chmp2aQ9DB34 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.39
Chmp2aQ9DB34 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Chmp2aQ9DB34 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Chmp2aQ9DB34 Wnk1-218ENSMUST00000161512 1426 ntBASIC6.4□□□□□ -1.39
Chmp2aQ9DB34 Gm43611-201ENSMUST00000196656 4352 ntBASIC6.4□□□□□ -1.39
Chmp2aQ9DB34 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Chmp2aQ9DB34 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
Chmp2aQ9DB34 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Chmp2aQ9DB34 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Chmp2aQ9DB34 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC6.4□□□□□ -1.39
Chmp2aQ9DB34 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC6.4□□□□□ -1.39
Chmp2aQ9DB34 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Chmp2aQ9DB34 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 Gm42940-201ENSMUST00000200361 2362 ntBASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 Gm23311-201ENSMUST00000104152 134 ntBASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 Gm23386-201ENSMUST00000158585 144 ntBASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 Gm6541-201ENSMUST00000165542 561 ntBASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 Gm20620-201ENSMUST00000177528 168 ntBASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 Mir7082-201ENSMUST00000183526 92 ntBASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 Gm29111-201ENSMUST00000188823 696 ntBASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 Gm19087-201ENSMUST00000191430 946 ntBASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 Gm28584-201ENSMUST00000191489 696 ntBASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 Gm38138-201ENSMUST00000193274 696 ntBASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 Gm37991-201ENSMUST00000194297 696 ntBASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 Gm43561-201ENSMUST00000199866 448 ntBASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 Gm18628-201ENSMUST00000220584 475 ntBASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 AC211878.1-201ENSMUST00000221668 474 ntBASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 AC131187.2-201ENSMUST00000223936 994 ntBASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 Gm42975-201ENSMUST00000200612 1491 ntBASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Chmp2aQ9DB34 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Chmp2aQ9DB34 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Chmp2aQ9DB34 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Chmp2aQ9DB34 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms