Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Smc1aQ9CU62 Gm42998-201ENSMUST00000197053 2371 ntBASIC7.02□□□□□ -1.29
Smc1aQ9CU62 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Smc1aQ9CU62 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Smc1aQ9CU62 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Smc1aQ9CU62 AC122828.2-201ENSMUST00000222511 2880 ntBASIC7.02□□□□□ -1.29
Smc1aQ9CU62 Gm13835-201ENSMUST00000118459 685 ntBASIC7.02□□□□□ -1.29
Smc1aQ9CU62 Gm5387-201ENSMUST00000119776 857 ntBASIC7.02□□□□□ -1.29
Smc1aQ9CU62 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC7.02□□□□□ -1.29
Smc1aQ9CU62 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
Smc1aQ9CU62 Gm20432-201ENSMUST00000173716 250 ntBASIC7.02□□□□□ -1.29
Smc1aQ9CU62 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC7.02□□□□□ -1.29
Smc1aQ9CU62 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC7.02□□□□□ -1.29
Smc1aQ9CU62 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Smc1aQ9CU62 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC7.02□□□□□ -1.29
Smc1aQ9CU62 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
Smc1aQ9CU62 Gm18447-201ENSMUST00000187501 307 ntBASIC7.02□□□□□ -1.29
Smc1aQ9CU62 Gm7270-201ENSMUST00000195818 1128 ntBASIC7.02□□□□□ -1.29
Smc1aQ9CU62 Gm18009-201ENSMUST00000203239 1016 ntBASIC7.02□□□□□ -1.29
Smc1aQ9CU62 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC7.02□□□□□ -1.29
Smc1aQ9CU62 Gm46364-201ENSMUST00000218548 319 ntBASIC7.02□□□□□ -1.29
Smc1aQ9CU62 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC7.02□□□□□ -1.29
Smc1aQ9CU62 Gm33312-201ENSMUST00000222443 332 ntBASIC7.02□□□□□ -1.29
Smc1aQ9CU62 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC7.02□□□□□ -1.29
Smc1aQ9CU62 AC163631.1-201ENSMUST00000225041 598 ntBASIC7.02□□□□□ -1.29
Smc1aQ9CU62 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Smc1aQ9CU62 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Smc1aQ9CU62 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Smc1aQ9CU62 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Smc1aQ9CU62 Gm37953-201ENSMUST00000195293 1884 ntBASIC7.02□□□□□ -1.29
Smc1aQ9CU62 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.29
Smc1aQ9CU62 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Smc1aQ9CU62 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Smc1aQ9CU62 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
Smc1aQ9CU62 Gm43469-201ENSMUST00000196084 4634 ntBASIC7.02□□□□□ -1.29
Smc1aQ9CU62 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Smc1aQ9CU62 Gm43029-201ENSMUST00000201829 1535 ntBASIC7.01□□□□□ -1.29
Smc1aQ9CU62 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Smc1aQ9CU62 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Smc1aQ9CU62 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Smc1aQ9CU62 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
Smc1aQ9CU62 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Smc1aQ9CU62 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Smc1aQ9CU62 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Smc1aQ9CU62 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Smc1aQ9CU62 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Smc1aQ9CU62 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Smc1aQ9CU62 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
Smc1aQ9CU62 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC7.01□□□□□ -1.29
Smc1aQ9CU62 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Smc1aQ9CU62 Gm12677-201ENSMUST00000118668 426 ntBASIC7.01□□□□□ -1.29
Smc1aQ9CU62 Gm15786-201ENSMUST00000121079 450 ntBASIC7.01□□□□□ -1.29
Smc1aQ9CU62 Rps29-ps-201ENSMUST00000122083 172 ntBASIC7.01□□□□□ -1.29
Smc1aQ9CU62 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Smc1aQ9CU62 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC7.01□□□□□ -1.29
Smc1aQ9CU62 Gm26410-201ENSMUST00000157670 261 ntBASIC7.01□□□□□ -1.29
Smc1aQ9CU62 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC7.01□□□□□ -1.29
Smc1aQ9CU62 Gm6918-201ENSMUST00000167622 1222 ntBASIC7.01□□□□□ -1.29
Smc1aQ9CU62 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC7.01□□□□□ -1.29
Smc1aQ9CU62 Gm17048-201ENSMUST00000179266 847 ntBASIC7.01□□□□□ -1.29
Smc1aQ9CU62 Gm27005-201ENSMUST00000182783 921 ntBASIC7.01□□□□□ -1.29
Smc1aQ9CU62 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Smc1aQ9CU62 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC7.01□□□□□ -1.29
Smc1aQ9CU62 Gm7343-201ENSMUST00000194510 1061 ntBASIC7.01□□□□□ -1.29
Smc1aQ9CU62 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC7.01□□□□□ -1.29
Smc1aQ9CU62 Gm18914-201ENSMUST00000214625 616 ntBASIC7.01□□□□□ -1.29
Smc1aQ9CU62 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Smc1aQ9CU62 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Smc1aQ9CU62 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Smc1aQ9CU62 Gm43363-201ENSMUST00000201590 2647 ntBASIC7.01□□□□□ -1.29
Smc1aQ9CU62 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Smc1aQ9CU62 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC7.01□□□□□ -1.29
Smc1aQ9CU62 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
Smc1aQ9CU62 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Smc1aQ9CU62 AC154612.1-202ENSMUST00000224806 1725 ntBASIC7.01□□□□□ -1.29
Smc1aQ9CU62 Gm43874-201ENSMUST00000204853 2798 ntBASIC7.01□□□□□ -1.29
Smc1aQ9CU62 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Smc1aQ9CU62 Gm43588-201ENSMUST00000201862 2298 ntBASIC7.01□□□□□ -1.29
Smc1aQ9CU62 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Smc1aQ9CU62 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Smc1aQ9CU62 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC7□□□□□ -1.29
Smc1aQ9CU62 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC7□□□□□ -1.29
Smc1aQ9CU62 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Smc1aQ9CU62 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Smc1aQ9CU62 Gm37775-201ENSMUST00000194120 2313 ntBASIC7□□□□□ -1.29
Smc1aQ9CU62 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC7□□□□□ -1.29
Smc1aQ9CU62 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Smc1aQ9CU62 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Smc1aQ9CU62 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC7□□□□□ -1.29
Smc1aQ9CU62 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Smc1aQ9CU62 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC7□□□□□ -1.29
Smc1aQ9CU62 Gm26422-201ENSMUST00000104276 132 ntBASIC7□□□□□ -1.29
Smc1aQ9CU62 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Smc1aQ9CU62 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC7□□□□□ -1.29
Smc1aQ9CU62 Gm22710-201ENSMUST00000116892 125 ntBASIC7□□□□□ -1.29
Smc1aQ9CU62 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC7□□□□□ -1.29
Smc1aQ9CU62 Gm4914-201ENSMUST00000119757 459 ntBASIC7□□□□□ -1.29
Smc1aQ9CU62 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC7□□□□□ -1.29
Smc1aQ9CU62 Gm25116-201ENSMUST00000157191 122 ntBASIC7□□□□□ -1.29
Smc1aQ9CU62 Gm22701-201ENSMUST00000175371 291 ntBASIC7□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms