Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Gm37943-201ENSMUST00000194053 3944 ntBASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Gm12057-201ENSMUST00000117244 1427 ntBASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 AC121960.2-201ENSMUST00000227349 3446 ntBASIC6.48□□□□□ -1.37
Rpa3Q9CQ71 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Rpa3Q9CQ71 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Rpa3Q9CQ71 Xpo7-203ENSMUST00000226448 3663 ntBASIC6.48□□□□□ -1.37
Rpa3Q9CQ71 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Rpa3Q9CQ71 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Rpa3Q9CQ71 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Rpa3Q9CQ71 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Rpa3Q9CQ71 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Rpa3Q9CQ71 Gm36947-201ENSMUST00000194709 2249 ntBASIC6.48□□□□□ -1.37
Rpa3Q9CQ71 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Rpa3Q9CQ71 Gm37953-201ENSMUST00000195293 1884 ntBASIC6.48□□□□□ -1.37
Rpa3Q9CQ71 Gm14294-201ENSMUST00000119749 751 ntBASIC6.48□□□□□ -1.37
Rpa3Q9CQ71 Calr-ps-201ENSMUST00000121776 485 ntBASIC6.48□□□□□ -1.37
Rpa3Q9CQ71 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC6.48□□□□□ -1.37
Rpa3Q9CQ71 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Rpa3Q9CQ71 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Rpa3Q9CQ71 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Rpa3Q9CQ71 Gm23954-201ENSMUST00000157213 353 ntBASIC6.48□□□□□ -1.37
Rpa3Q9CQ71 Gm23553-201ENSMUST00000157817 295 ntBASIC6.48□□□□□ -1.37
Rpa3Q9CQ71 Gm18006-201ENSMUST00000177411 662 ntBASIC6.48□□□□□ -1.37
Rpa3Q9CQ71 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Rpa3Q9CQ71 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Rpa3Q9CQ71 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC6.48□□□□□ -1.37
Rpa3Q9CQ71 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Rpa3Q9CQ71 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC6.48□□□□□ -1.37
Rpa3Q9CQ71 Gm8863-201ENSMUST00000216630 926 ntBASIC6.48□□□□□ -1.37
Rpa3Q9CQ71 Gm3266-201ENSMUST00000217832 591 ntBASIC6.48□□□□□ -1.37
Rpa3Q9CQ71 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
Rpa3Q9CQ71 Gm22351-201ENSMUST00000083925 107 ntBASIC6.48□□□□□ -1.37
Rpa3Q9CQ71 Gm42607-201ENSMUST00000200221 3393 ntBASIC6.48□□□□□ -1.37
Rpa3Q9CQ71 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC6.48□□□□□ -1.37
Rpa3Q9CQ71 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Rpa3Q9CQ71 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Rpa3Q9CQ71 Gm44697-201ENSMUST00000207756 1679 ntBASIC6.48□□□□□ -1.37
Rpa3Q9CQ71 AC167013.5-201ENSMUST00000227597 2947 ntBASIC6.48□□□□□ -1.37
Rpa3Q9CQ71 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC6.48□□□□□ -1.37
Rpa3Q9CQ71 Gm15425-201ENSMUST00000119013 2711 ntBASIC6.48□□□□□ -1.37
Rpa3Q9CQ71 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 Gm38263-201ENSMUST00000195879 3059 ntBASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 Gm38284-201ENSMUST00000194803 4539 ntBASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 Gm13870-201ENSMUST00000117214 1023 ntBASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 Gm11462-201ENSMUST00000117749 562 ntBASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 Gm25219-201ENSMUST00000157545 330 ntBASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 Gm3344-201ENSMUST00000169610 603 ntBASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 Gm29663-201ENSMUST00000186962 853 ntBASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 Gm37189-201ENSMUST00000192131 298 ntBASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 Gm7343-201ENSMUST00000194510 1061 ntBASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 Gm9685-201ENSMUST00000211275 538 ntBASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 AC154904.1-201ENSMUST00000219510 312 ntBASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 CT010431.1-201ENSMUST00000221249 1080 ntBASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 AC122459.2-201ENSMUST00000227099 638 ntBASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 Mir194-1-201ENSMUST00000083647 67 ntBASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 Gm22581-201ENSMUST00000083735 136 ntBASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 Gm42892-201ENSMUST00000196227 3973 ntBASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 AC158595.1-201ENSMUST00000217989 1435 ntBASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rpa3Q9CQ71 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 98.3 ms