Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 n-R5s29-201ENSMUST00000082836 119 ntBASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC7.9□□□□□ -1.15
Trim11Q99PQ2 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.15
Trim11Q99PQ2 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Trim11Q99PQ2 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.15
Trim11Q99PQ2 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC7.9□□□□□ -1.15
Trim11Q99PQ2 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
Trim11Q99PQ2 AC138765.2-202ENSMUST00000228418 3435 ntBASIC7.9□□□□□ -1.15
Trim11Q99PQ2 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Trim11Q99PQ2 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.15
Trim11Q99PQ2 AC154576.1-202ENSMUST00000223966 3320 ntBASIC7.9□□□□□ -1.15
Trim11Q99PQ2 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC7.89□□□□□ -1.15
Trim11Q99PQ2 AC162301.1-201ENSMUST00000228785 1542 ntBASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC7.89□□□□□ -1.15
Trim11Q99PQ2 AC161884.1-201ENSMUST00000225436 2174 ntBASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Gm25498-201ENSMUST00000104424 129 ntBASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Gm4914-201ENSMUST00000119757 459 ntBASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Gm5135-201ENSMUST00000121100 573 ntBASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Gm24840-201ENSMUST00000122603 147 ntBASIC7.89□□□□□ -1.15
Trim11Q99PQ2 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC7.89□□□□□ -1.15
Trim11Q99PQ2 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Gm14651-201ENSMUST00000147192 442 ntBASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Gm23228-201ENSMUST00000157296 270 ntBASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Gm23891-201ENSMUST00000158114 138 ntBASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Gm7420-201ENSMUST00000162836 842 ntBASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Trim11Q99PQ2 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Gm28958-201ENSMUST00000185864 703 ntBASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Gm20690-202ENSMUST00000195126 355 ntBASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Gm30517-201ENSMUST00000197350 772 ntBASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Gm42558-201ENSMUST00000200982 265 ntBASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Gm43040-201ENSMUST00000202399 558 ntBASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Gm31532-201ENSMUST00000203555 767 ntBASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Gm44727-201ENSMUST00000204225 451 ntBASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Gm19032-201ENSMUST00000208584 592 ntBASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Gm45693-201ENSMUST00000211391 1157 ntBASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Gm17997-201ENSMUST00000211801 840 ntBASIC7.89□□□□□ -1.15
Trim11Q99PQ2 AC102582.1-201ENSMUST00000215376 378 ntBASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Gm6667-201ENSMUST00000217169 564 ntBASIC7.89□□□□□ -1.15
Trim11Q99PQ2 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim11Q99PQ2 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC7.89□□□□□ -1.15
Trim11Q99PQ2 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC7.89□□□□□ -1.15
Trim11Q99PQ2 AC152819.1-201ENSMUST00000220435 871 ntTSL 5 BASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Gm19011-201ENSMUST00000221777 808 ntBASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Mylf-ps-201ENSMUST00000222174 421 ntBASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Mif-ps7-201ENSMUST00000223357 327 ntBASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Gm43953-201ENSMUST00000203709 2867 ntBASIC7.89□□□□□ -1.15
Trim11Q99PQ2 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Gm19024-201ENSMUST00000194681 1319 ntBASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Gm44527-202ENSMUST00000204519 1314 ntBASIC7.88□□□□□ -1.15
Trim11Q99PQ2 AC117608.1-201ENSMUST00000225500 3418 ntBASIC7.88□□□□□ -1.15
Trim11Q99PQ2 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Gm20768-201ENSMUST00000199527 2338 ntBASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Gm42606-201ENSMUST00000114209 239 ntBASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Gm9439-201ENSMUST00000119554 973 ntBASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Gm16260-201ENSMUST00000155141 304 ntBASIC7.88□□□□□ -1.15
Trim11Q99PQ2 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Gm26393-201ENSMUST00000157625 129 ntBASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Gm26468-201ENSMUST00000158644 106 ntBASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Gm18415-201ENSMUST00000177464 647 ntBASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Gm8245-201ENSMUST00000182434 987 ntBASIC7.88□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms