Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm28738-201ENSMUST00000187480 696 ntBASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm28949-201ENSMUST00000187805 696 ntBASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm28773-201ENSMUST00000187925 696 ntBASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm29319-201ENSMUST00000188060 696 ntBASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm29422-201ENSMUST00000188062 694 ntBASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm28787-201ENSMUST00000188357 696 ntBASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm29312-201ENSMUST00000188724 696 ntBASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm29451-201ENSMUST00000188862 696 ntBASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm29637-201ENSMUST00000188877 696 ntBASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm29033-201ENSMUST00000189114 696 ntBASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm29614-201ENSMUST00000189263 694 ntBASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm28751-201ENSMUST00000189287 696 ntBASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm29559-201ENSMUST00000189412 696 ntBASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm28272-201ENSMUST00000189512 696 ntBASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm28483-201ENSMUST00000189519 696 ntBASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm28123-201ENSMUST00000189725 696 ntBASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm28368-201ENSMUST00000189804 696 ntBASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm29119-201ENSMUST00000189973 696 ntBASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm28716-201ENSMUST00000190217 696 ntBASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm29239-201ENSMUST00000190304 696 ntBASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm28837-201ENSMUST00000190397 696 ntBASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm28531-201ENSMUST00000190529 696 ntBASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm28165-201ENSMUST00000190669 694 ntBASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm29181-201ENSMUST00000191288 696 ntBASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm32347-201ENSMUST00000192944 696 ntBASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm37990-201ENSMUST00000195821 696 ntBASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm43762-201ENSMUST00000201521 295 ntBASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm18995-201ENSMUST00000202981 520 ntBASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm17918-201ENSMUST00000205315 574 ntBASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm18645-201ENSMUST00000209593 651 ntBASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm45789-201ENSMUST00000213038 364 ntBASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 AC107663.1-201ENSMUST00000224257 468 ntBASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm25582-201ENSMUST00000083412 110 ntBASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Sidt1-204ENSMUST00000127567 2901 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 2310015D24Rik-202ENSMUST00000187920 2917 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm15681-201ENSMUST00000137501 2704 ntBASIC6.7□□□□□ -1.34
Nkx6-1Q99MA9 Gm16153-201ENSMUST00000132184 4118 ntTSL 5 BASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Ifit1bl2-202ENSMUST00000112463 3217 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Olfr1241-203ENSMUST00000215055 2441 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Dgkh-204ENSMUST00000227767 3319 ntBASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Mr1-201ENSMUST00000027744 2512 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Gm25785-201ENSMUST00000104129 125 ntBASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Gm13815-201ENSMUST00000119963 412 ntBASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Gm15349-201ENSMUST00000121154 204 ntBASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Prepl-202ENSMUST00000171795 3830 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Mir5110-201ENSMUST00000175537 87 ntBASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Gm7266-201ENSMUST00000187999 405 ntBASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Gm37196-201ENSMUST00000194762 906 ntBASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Gm37637-201ENSMUST00000195540 1256 ntBASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Gm8861-201ENSMUST00000196346 832 ntBASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC6.69□□□□□ -1.34
Nkx6-1Q99MA9 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms