Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Scrt1Q99M85 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC5.51□□□□□ -1.53
Scrt1Q99M85 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Scrt1Q99M85 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Scrt1Q99M85 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Scrt1Q99M85 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Scrt1Q99M85 Gm21728-201ENSMUST00000188442 695 ntBASIC5.51□□□□□ -1.53
Scrt1Q99M85 Gm21889-201ENSMUST00000188487 695 ntBASIC5.51□□□□□ -1.53
Scrt1Q99M85 Gm20932-201ENSMUST00000189115 694 ntBASIC5.51□□□□□ -1.53
Scrt1Q99M85 Gm21920-201ENSMUST00000190042 695 ntBASIC5.51□□□□□ -1.53
Scrt1Q99M85 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Scrt1Q99M85 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Scrt1Q99M85 Ighv5-3-201ENSMUST00000195336 322 ntBASIC5.51□□□□□ -1.53
Scrt1Q99M85 Igkv4-83-201ENSMUST00000196933 334 ntBASIC5.51□□□□□ -1.53
Scrt1Q99M85 Gm7663-201ENSMUST00000201151 1240 ntBASIC5.51□□□□□ -1.53
Scrt1Q99M85 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC5.51□□□□□ -1.53
Scrt1Q99M85 Gm45850-201ENSMUST00000212536 338 ntBASIC5.51□□□□□ -1.53
Scrt1Q99M85 Gm7570-201ENSMUST00000215246 698 ntBASIC5.51□□□□□ -1.53
Scrt1Q99M85 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC5.51□□□□□ -1.53
Scrt1Q99M85 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Scrt1Q99M85 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Scrt1Q99M85 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
Scrt1Q99M85 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Scrt1Q99M85 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
Scrt1Q99M85 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Scrt1Q99M85 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Scrt1Q99M85 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Scrt1Q99M85 Gm45762-201ENSMUST00000212863 2619 ntBASIC5.51□□□□□ -1.53
Scrt1Q99M85 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Scrt1Q99M85 AC123629.1-201ENSMUST00000225669 1364 ntBASIC5.51□□□□□ -1.53
Scrt1Q99M85 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Scrt1Q99M85 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Scrt1Q99M85 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
Scrt1Q99M85 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Scrt1Q99M85 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Scrt1Q99M85 AC121094.1-201ENSMUST00000224766 1345 ntBASIC5.5□□□□□ -1.53
Scrt1Q99M85 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Scrt1Q99M85 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Scrt1Q99M85 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC5.5□□□□□ -1.53
Scrt1Q99M85 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Scrt1Q99M85 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC5.5□□□□□ -1.53
Scrt1Q99M85 AC129308.2-203ENSMUST00000224109 2385 ntBASIC5.5□□□□□ -1.53
Scrt1Q99M85 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Scrt1Q99M85 Gm14849-201ENSMUST00000122293 2846 ntBASIC5.5□□□□□ -1.53
Scrt1Q99M85 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Scrt1Q99M85 Thap6-201ENSMUST00000191860 3151 ntBASIC5.5□□□□□ -1.53
Scrt1Q99M85 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Scrt1Q99M85 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Scrt1Q99M85 Gm13641-201ENSMUST00000117993 473 ntBASIC5.5□□□□□ -1.53
Scrt1Q99M85 Gm14038-201ENSMUST00000121500 807 ntBASIC5.5□□□□□ -1.53
Scrt1Q99M85 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC5.5□□□□□ -1.53
Scrt1Q99M85 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC5.5□□□□□ -1.53
Scrt1Q99M85 Gm22820-201ENSMUST00000157205 329 ntBASIC5.5□□□□□ -1.53
Scrt1Q99M85 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Scrt1Q99M85 Gm7713-201ENSMUST00000181201 1007 ntBASIC5.5□□□□□ -1.53
Scrt1Q99M85 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Scrt1Q99M85 Gm27219-201ENSMUST00000184633 742 ntBASIC5.5□□□□□ -1.53
Scrt1Q99M85 Gm5692-201ENSMUST00000187254 1057 ntBASIC5.5□□□□□ -1.53
Scrt1Q99M85 Gm8581-201ENSMUST00000188636 890 ntBASIC5.5□□□□□ -1.53
Scrt1Q99M85 Gm18290-201ENSMUST00000202900 844 ntBASIC5.5□□□□□ -1.53
Scrt1Q99M85 Gm44225-201ENSMUST00000203582 186 ntBASIC5.5□□□□□ -1.53
Scrt1Q99M85 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Scrt1Q99M85 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC5.5□□□□□ -1.53
Scrt1Q99M85 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Scrt1Q99M85 AC140409.4-201ENSMUST00000215757 538 ntBASIC5.5□□□□□ -1.53
Scrt1Q99M85 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC5.5□□□□□ -1.53
Scrt1Q99M85 AC164618.3-201ENSMUST00000224863 681 ntBASIC5.5□□□□□ -1.53
Scrt1Q99M85 AC154595.2-201ENSMUST00000225067 310 ntBASIC5.5□□□□□ -1.53
Scrt1Q99M85 AC122459.2-201ENSMUST00000227099 638 ntBASIC5.5□□□□□ -1.53
Scrt1Q99M85 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Scrt1Q99M85 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Scrt1Q99M85 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Scrt1Q99M85 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
Scrt1Q99M85 Gm7731-201ENSMUST00000091759 470 ntBASIC5.5□□□□□ -1.53
Scrt1Q99M85 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Scrt1Q99M85 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Scrt1Q99M85 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Scrt1Q99M85 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Scrt1Q99M85 AC158537.1-201ENSMUST00000224637 1711 ntBASIC5.5□□□□□ -1.53
Scrt1Q99M85 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Scrt1Q99M85 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
Scrt1Q99M85 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Scrt1Q99M85 Gm5512-201ENSMUST00000218013 1353 ntBASIC5.5□□□□□ -1.53
Scrt1Q99M85 AC140393.3-201ENSMUST00000228396 1352 ntBASIC5.5□□□□□ -1.53
Scrt1Q99M85 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
Scrt1Q99M85 Gm14367-201ENSMUST00000119214 1497 ntBASIC5.5□□□□□ -1.53
Scrt1Q99M85 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Scrt1Q99M85 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Scrt1Q99M85 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Scrt1Q99M85 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Scrt1Q99M85 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Scrt1Q99M85 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Scrt1Q99M85 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Scrt1Q99M85 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Scrt1Q99M85 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Scrt1Q99M85 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Scrt1Q99M85 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Scrt1Q99M85 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Scrt1Q99M85 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Scrt1Q99M85 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms