Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC8.34□□□□□ -1.07
RtcbQ99LF4 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
RtcbQ99LF4 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
RtcbQ99LF4 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
RtcbQ99LF4 Mir6348-201ENSMUST00000183804 120 ntBASIC8.34□□□□□ -1.07
RtcbQ99LF4 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RtcbQ99LF4 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
RtcbQ99LF4 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RtcbQ99LF4 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RtcbQ99LF4 Gm37433-201ENSMUST00000192695 678 ntBASIC8.34□□□□□ -1.07
RtcbQ99LF4 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
RtcbQ99LF4 Gm37441-201ENSMUST00000194430 678 ntBASIC8.34□□□□□ -1.07
RtcbQ99LF4 Gm3544-201ENSMUST00000196129 305 ntBASIC8.34□□□□□ -1.07
RtcbQ99LF4 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC8.34□□□□□ -1.07
RtcbQ99LF4 Gm43725-201ENSMUST00000200122 369 ntBASIC8.34□□□□□ -1.07
RtcbQ99LF4 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC8.34□□□□□ -1.07
RtcbQ99LF4 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC8.34□□□□□ -1.07
RtcbQ99LF4 Gm9231-201ENSMUST00000220817 1009 ntBASIC8.34□□□□□ -1.07
RtcbQ99LF4 AC163660.1-201ENSMUST00000223696 818 ntBASIC8.34□□□□□ -1.07
RtcbQ99LF4 n-R5s58-201ENSMUST00000093682 119 ntBASIC8.34□□□□□ -1.07
RtcbQ99LF4 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC8.34□□□□□ -1.07
RtcbQ99LF4 Abcb11-204ENSMUST00000180142 4963 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
RtcbQ99LF4 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
RtcbQ99LF4 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
RtcbQ99LF4 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
RtcbQ99LF4 Gm37786-201ENSMUST00000191714 3225 ntBASIC8.34□□□□□ -1.07
RtcbQ99LF4 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RtcbQ99LF4 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
RtcbQ99LF4 Gm42685-201ENSMUST00000200378 2390 ntBASIC8.34□□□□□ -1.07
RtcbQ99LF4 Snhg17-209ENSMUST00000186993 3144 ntBASIC8.34□□□□□ -1.08
RtcbQ99LF4 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC8.33□□□□□ -1.08
RtcbQ99LF4 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
RtcbQ99LF4 AC129208.1-201ENSMUST00000227474 2906 ntBASIC8.33□□□□□ -1.08
RtcbQ99LF4 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RtcbQ99LF4 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
RtcbQ99LF4 Gm37598-201ENSMUST00000194506 1301 ntBASIC8.33□□□□□ -1.08
RtcbQ99LF4 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
RtcbQ99LF4 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
RtcbQ99LF4 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
RtcbQ99LF4 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
RtcbQ99LF4 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
RtcbQ99LF4 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
RtcbQ99LF4 Gm8844-201ENSMUST00000119460 2614 ntBASIC8.33□□□□□ -1.08
RtcbQ99LF4 Gm16511-201ENSMUST00000120019 564 ntBASIC8.33□□□□□ -1.08
RtcbQ99LF4 Gm12706-201ENSMUST00000121588 698 ntBASIC8.33□□□□□ -1.08
RtcbQ99LF4 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC8.33□□□□□ -1.08
RtcbQ99LF4 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RtcbQ99LF4 Atp2b4-208ENSMUST00000167348 243 ntBASIC8.33□□□□□ -1.08
RtcbQ99LF4 Gm20401-201ENSMUST00000173717 212 ntBASIC8.33□□□□□ -1.08
RtcbQ99LF4 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC8.33□□□□□ -1.08
RtcbQ99LF4 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC8.33□□□□□ -1.08
RtcbQ99LF4 Gm16456-201ENSMUST00000174431 920 ntBASIC8.33□□□□□ -1.08
RtcbQ99LF4 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RtcbQ99LF4 Gm27960-201ENSMUST00000183445 184 ntBASIC8.33□□□□□ -1.08
RtcbQ99LF4 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC8.33□□□□□ -1.08
RtcbQ99LF4 Gm29184-201ENSMUST00000190038 334 ntBASIC8.33□□□□□ -1.08
RtcbQ99LF4 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
RtcbQ99LF4 Gm42753-201ENSMUST00000196718 1268 ntBASIC8.33□□□□□ -1.08
RtcbQ99LF4 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC8.33□□□□□ -1.08
RtcbQ99LF4 Gm44360-201ENSMUST00000200081 82 ntBASIC8.33□□□□□ -1.08
RtcbQ99LF4 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RtcbQ99LF4 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC8.33□□□□□ -1.08
RtcbQ99LF4 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC8.33□□□□□ -1.08
RtcbQ99LF4 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
RtcbQ99LF4 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC8.33□□□□□ -1.08
RtcbQ99LF4 AC113125.2-201ENSMUST00000226837 362 ntBASIC8.33□□□□□ -1.08
RtcbQ99LF4 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC8.33□□□□□ -1.08
RtcbQ99LF4 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
RtcbQ99LF4 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC8.33□□□□□ -1.08
RtcbQ99LF4 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
RtcbQ99LF4 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RtcbQ99LF4 Gm25135-201ENSMUST00000082648 143 ntBASIC8.33□□□□□ -1.08
RtcbQ99LF4 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
RtcbQ99LF4 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RtcbQ99LF4 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RtcbQ99LF4 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
RtcbQ99LF4 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
RtcbQ99LF4 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
RtcbQ99LF4 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RtcbQ99LF4 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RtcbQ99LF4 Gm44777-201ENSMUST00000205941 4052 ntBASIC8.33□□□□□ -1.08
RtcbQ99LF4 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RtcbQ99LF4 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
RtcbQ99LF4 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RtcbQ99LF4 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
RtcbQ99LF4 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RtcbQ99LF4 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
RtcbQ99LF4 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC8.33□□□□□ -1.08
RtcbQ99LF4 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RtcbQ99LF4 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RtcbQ99LF4 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RtcbQ99LF4 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
RtcbQ99LF4 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RtcbQ99LF4 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RtcbQ99LF4 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
RtcbQ99LF4 AC166574.1-201ENSMUST00000226916 1309 ntBASIC8.32□□□□□ -1.08
RtcbQ99LF4 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RtcbQ99LF4 Prkaa1-202ENSMUST00000228218 4618 ntBASIC8.32□□□□□ -1.08
RtcbQ99LF4 Gm38697-201ENSMUST00000198061 1746 ntBASIC8.32□□□□□ -1.08
RtcbQ99LF4 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms