Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gm25906-201ENSMUST00000158489 126 ntBASIC6.32□□□□□ -1.4
Cstf1Q99LC2 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC6.32□□□□□ -1.4
Cstf1Q99LC2 Gm2325-201ENSMUST00000186637 581 ntBASIC6.32□□□□□ -1.4
Cstf1Q99LC2 Gm6137-201ENSMUST00000187552 578 ntBASIC6.32□□□□□ -1.4
Cstf1Q99LC2 Gm29159-201ENSMUST00000187969 379 ntBASIC6.32□□□□□ -1.4
Cstf1Q99LC2 Gm9710-201ENSMUST00000198053 499 ntBASIC6.32□□□□□ -1.4
Cstf1Q99LC2 Gm17997-201ENSMUST00000211801 840 ntBASIC6.32□□□□□ -1.4
Cstf1Q99LC2 Gm10688-201ENSMUST00000214985 520 ntBASIC6.32□□□□□ -1.4
Cstf1Q99LC2 AC135353.1-201ENSMUST00000215330 630 ntBASIC6.32□□□□□ -1.4
Cstf1Q99LC2 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC6.32□□□□□ -1.4
Cstf1Q99LC2 AC110381.1-201ENSMUST00000218987 586 ntBASIC6.32□□□□□ -1.4
Cstf1Q99LC2 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC6.32□□□□□ -1.4
Cstf1Q99LC2 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC6.32□□□□□ -1.4
Cstf1Q99LC2 AC154646.1-201ENSMUST00000225011 1092 ntBASIC6.32□□□□□ -1.4
Cstf1Q99LC2 AC113198.1-201ENSMUST00000226353 832 ntBASIC6.32□□□□□ -1.4
Cstf1Q99LC2 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cstf1Q99LC2 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cstf1Q99LC2 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cstf1Q99LC2 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Cstf1Q99LC2 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cstf1Q99LC2 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Cstf1Q99LC2 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cstf1Q99LC2 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Cstf1Q99LC2 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Cstf1Q99LC2 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
Cstf1Q99LC2 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cstf1Q99LC2 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cstf1Q99LC2 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Cstf1Q99LC2 Gm14245-201ENSMUST00000118939 1843 ntBASIC6.32□□□□□ -1.4
Cstf1Q99LC2 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Cstf1Q99LC2 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Gm43719-201ENSMUST00000200088 2199 ntBASIC6.31□□□□□ -1.4
Cstf1Q99LC2 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Gm37725-201ENSMUST00000193965 2125 ntBASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Gm38322-201ENSMUST00000194074 2300 ntBASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Gm37278-201ENSMUST00000191619 2872 ntBASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Gm24989-201ENSMUST00000104461 88 ntBASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Gm25345-201ENSMUST00000104505 133 ntBASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Gm13013-201ENSMUST00000119087 523 ntBASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Gm4789-201ENSMUST00000121708 1216 ntBASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Gm22917-201ENSMUST00000180116 110 ntBASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Gm28883-201ENSMUST00000189256 369 ntBASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Gm18290-201ENSMUST00000202900 844 ntBASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Gm45127-201ENSMUST00000205984 1015 ntBASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Gm17988-201ENSMUST00000208796 535 ntBASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Gm45724-201ENSMUST00000213031 420 ntBASIC6.31□□□□□ -1.4
Cstf1Q99LC2 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC6.31□□□□□ -1.4
Cstf1Q99LC2 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Gm36262-201ENSMUST00000223274 499 ntBASIC6.31□□□□□ -1.4
Cstf1Q99LC2 AC168062.1-201ENSMUST00000228048 769 ntBASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Gm42507-201ENSMUST00000201187 2555 ntBASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Cstf1Q99LC2 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Gm37685-201ENSMUST00000193507 2177 ntBASIC6.3□□□□□ -1.4
Cstf1Q99LC2 AC151904.1-201ENSMUST00000219945 1498 ntBASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Gm13245-201ENSMUST00000119646 260 ntBASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Gm15801-201ENSMUST00000120920 522 ntBASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Gm22724-201ENSMUST00000158091 127 ntBASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Gm22636-201ENSMUST00000158142 275 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms