Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Pcdha9Q91Y11 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Pcdha9Q91Y11 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Pcdha9Q91Y11 AC156163.1-201ENSMUST00000215598 3369 ntBASIC6.78□□□□□ -1.32
Pcdha9Q91Y11 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Pcdha9Q91Y11 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC6.78□□□□□ -1.32
Pcdha9Q91Y11 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Pcdha9Q91Y11 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Pcdha9Q91Y11 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Pcdha9Q91Y11 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Pcdha9Q91Y11 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Pcdha9Q91Y11 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Pcdha9Q91Y11 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Pcdha9Q91Y11 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC6.77□□□□□ -1.32
Pcdha9Q91Y11 Gm37332-201ENSMUST00000195853 2844 ntBASIC6.77□□□□□ -1.32
Pcdha9Q91Y11 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 Gm45117-201ENSMUST00000207250 1774 ntBASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 Gm12442-201ENSMUST00000118372 338 ntBASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 Gm14913-201ENSMUST00000120011 1093 ntBASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 Gm14908-201ENSMUST00000120930 1286 ntBASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 Gm12369-201ENSMUST00000121343 942 ntBASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 Gm4789-201ENSMUST00000121708 1216 ntBASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 Gm14747-201ENSMUST00000149888 984 ntBASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 Gm8581-201ENSMUST00000188636 890 ntBASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 Gm38291-201ENSMUST00000193671 259 ntBASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 Gm43929-201ENSMUST00000203025 409 ntBASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 Gm20946-201ENSMUST00000212367 461 ntBASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 AC123533.2-201ENSMUST00000228176 375 ntBASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 AC154563.1-201ENSMUST00000228317 442 ntBASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 AC139197.1-201ENSMUST00000228332 813 ntBASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 Gm21051-201ENSMUST00000221757 1688 ntBASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 Gm37913-201ENSMUST00000192925 2544 ntBASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC6.77□□□□□ -1.33
Pcdha9Q91Y11 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 Gm42671-201ENSMUST00000198013 1604 ntBASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 Gm18508-201ENSMUST00000215790 1642 ntBASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 Gm45250-201ENSMUST00000209414 3592 ntBASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 Gm8722-201ENSMUST00000121466 769 ntBASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 Gm26167-201ENSMUST00000158423 253 ntBASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 Gm24812-201ENSMUST00000175315 284 ntBASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 Mir5107-201ENSMUST00000175586 88 ntBASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 Gm18700-201ENSMUST00000185791 553 ntBASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 Gm38237-201ENSMUST00000193366 376 ntBASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 Gm8869-201ENSMUST00000195222 947 ntBASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 Gm43354-201ENSMUST00000196862 346 ntBASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 Gm18290-201ENSMUST00000202900 844 ntBASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 AC132104.1-201ENSMUST00000213615 260 ntBASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 Gm18103-201ENSMUST00000216621 779 ntBASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 Gm9293-201ENSMUST00000223096 306 ntBASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 AC154633.1-201ENSMUST00000223276 449 ntBASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Pcdha9Q91Y11 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 114.5 ms