Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Gm17994-201ENSMUST00000209260 533 ntBASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Gm6009-201ENSMUST00000210848 280 ntBASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC5.96□□□□□ -1.46
Lsm1Q8VC85 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC5.96□□□□□ -1.46
Lsm1Q8VC85 AC122533.1-201ENSMUST00000225177 767 ntBASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
Lsm1Q8VC85 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Gm10723-201ENSMUST00000195366 6918 ntBASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Gm4973-201ENSMUST00000206925 1334 ntBASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Gm7108-201ENSMUST00000118038 3407 ntBASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.96□□□□□ -1.46
Lsm1Q8VC85 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Gm44416-201ENSMUST00000204055 2066 ntBASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Gm15715-201ENSMUST00000118032 283 ntBASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Gm13444-201ENSMUST00000119445 522 ntBASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Gm12101-201ENSMUST00000121590 390 ntBASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC5.95□□□□□ -1.46
Lsm1Q8VC85 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Gm23894-201ENSMUST00000158107 313 ntBASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Gm20454-201ENSMUST00000172713 221 ntBASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Gm27601-201ENSMUST00000184794 127 ntBASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Gm7019-201ENSMUST00000194122 369 ntBASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Gm37758-201ENSMUST00000194275 629 ntBASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Ighv1-10-201ENSMUST00000194372 355 ntBASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Gm37838-201ENSMUST00000194464 312 ntBASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Gm38085-201ENSMUST00000195785 3062 ntBASIC5.95□□□□□ -1.46
Lsm1Q8VC85 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Gm44463-201ENSMUST00000198895 137 ntBASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Gm19653-201ENSMUST00000204326 1039 ntBASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Gm44675-201ENSMUST00000208188 2927 ntBASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Gm19007-201ENSMUST00000217746 874 ntBASIC5.95□□□□□ -1.46
Lsm1Q8VC85 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Gm9267-201ENSMUST00000222831 404 ntBASIC5.95□□□□□ -1.46
Lsm1Q8VC85 AC154563.1-201ENSMUST00000228317 442 ntBASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Gm37435-201ENSMUST00000192078 3947 ntBASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Gm43981-201ENSMUST00000203285 1467 ntBASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
Lsm1Q8VC85 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Lsm1Q8VC85 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Lsm1Q8VC85 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Lsm1Q8VC85 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Lsm1Q8VC85 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Lsm1Q8VC85 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Lsm1Q8VC85 Gm37132-201ENSMUST00000195553 2238 ntBASIC5.94□□□□□ -1.46
Lsm1Q8VC85 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Lsm1Q8VC85 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
Lsm1Q8VC85 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC5.94□□□□□ -1.46
Lsm1Q8VC85 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC5.94□□□□□ -1.46
Lsm1Q8VC85 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC5.94□□□□□ -1.46
Lsm1Q8VC85 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Lsm1Q8VC85 Gm25785-201ENSMUST00000104129 125 ntBASIC5.94□□□□□ -1.46
Lsm1Q8VC85 Gm15366-201ENSMUST00000118433 1019 ntBASIC5.94□□□□□ -1.46
Lsm1Q8VC85 Gm12565-201ENSMUST00000119004 649 ntBASIC5.94□□□□□ -1.46
Lsm1Q8VC85 Gm13818-201ENSMUST00000119441 511 ntBASIC5.94□□□□□ -1.46
Lsm1Q8VC85 Gm4789-201ENSMUST00000121708 1216 ntBASIC5.94□□□□□ -1.46
Lsm1Q8VC85 Gm23888-201ENSMUST00000122690 253 ntBASIC5.94□□□□□ -1.46
Lsm1Q8VC85 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 92 ms