Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Gm42658-201ENSMUST00000197199 1575 ntBASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Gm8624-201ENSMUST00000118083 432 ntBASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Gm11962-201ENSMUST00000145746 255 ntBASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Gm4373-201ENSMUST00000178571 556 ntBASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Gm4308-201ENSMUST00000179735 914 ntBASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Gm5300-201ENSMUST00000182201 1003 ntBASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Gm28660-201ENSMUST00000186496 253 ntBASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Gm29369-201ENSMUST00000190674 615 ntBASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Gm8924-201ENSMUST00000197405 1132 ntBASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Gm2287-201ENSMUST00000197417 1084 ntBASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Gm17833-201ENSMUST00000197629 1065 ntBASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Gm18593-201ENSMUST00000200754 1139 ntBASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Gm21048-201ENSMUST00000202470 1166 ntBASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Gm44931-201ENSMUST00000206056 545 ntBASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Gm31663-202ENSMUST00000208481 1190 ntBASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 AC115793.1-201ENSMUST00000216605 215 ntBASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Gm18503-201ENSMUST00000220340 728 ntBASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Gm8672-201ENSMUST00000221200 332 ntBASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Gpr87-201ENSMUST00000056898 1080 ntBASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Gm23686-201ENSMUST00000083241 164 ntBASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Gm4991-201ENSMUST00000118899 1552 ntBASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC7.44□□□□□ -1.22
Ccdc9Q8VC31 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Gm44242-201ENSMUST00000204212 2721 ntBASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Gm25083-201ENSMUST00000102319 92 ntBASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Gm11970-201ENSMUST00000116105 320 ntBASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Gm16394-201ENSMUST00000117289 675 ntBASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Gm13641-201ENSMUST00000117993 473 ntBASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Gm13486-201ENSMUST00000119910 282 ntBASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Mir8120-201ENSMUST00000185035 139 ntBASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Gm28958-201ENSMUST00000185864 703 ntBASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Gm4785-201ENSMUST00000191025 751 ntBASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Gm29664-201ENSMUST00000191125 463 ntBASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Gm19080-201ENSMUST00000196082 550 ntBASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Gm36378-201ENSMUST00000201709 388 ntBASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Gm5305-201ENSMUST00000204010 746 ntBASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Gm44112-201ENSMUST00000204787 372 ntBASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Gm44979-201ENSMUST00000206218 287 ntBASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Gm44623-201ENSMUST00000207934 434 ntBASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Gm2225-201ENSMUST00000209570 377 ntBASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Gm7943-201ENSMUST00000212078 1034 ntBASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 AC164436.1-201ENSMUST00000227074 772 ntBASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 94 ms