Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Syne4Q8CII8 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Syne4Q8CII8 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Syne4Q8CII8 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Syne4Q8CII8 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Syne4Q8CII8 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC7.16□□□□□ -1.26
Syne4Q8CII8 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC7.16□□□□□ -1.26
Syne4Q8CII8 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Syne4Q8CII8 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Syne4Q8CII8 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Syne4Q8CII8 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Syne4Q8CII8 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
Syne4Q8CII8 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC7.16□□□□□ -1.26
Syne4Q8CII8 Gm13245-201ENSMUST00000119646 260 ntBASIC7.16□□□□□ -1.26
Syne4Q8CII8 Gm14900-201ENSMUST00000120304 733 ntBASIC7.16□□□□□ -1.26
Syne4Q8CII8 Gm13998-201ENSMUST00000120952 335 ntBASIC7.16□□□□□ -1.26
Syne4Q8CII8 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Syne4Q8CII8 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Syne4Q8CII8 Gm11545-201ENSMUST00000146507 375 ntBASIC7.16□□□□□ -1.26
Syne4Q8CII8 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC7.16□□□□□ -1.26
Syne4Q8CII8 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC7.16□□□□□ -1.26
Syne4Q8CII8 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC7.16□□□□□ -1.26
Syne4Q8CII8 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Syne4Q8CII8 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC7.16□□□□□ -1.26
Syne4Q8CII8 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Syne4Q8CII8 Gm28883-201ENSMUST00000189256 369 ntBASIC7.16□□□□□ -1.26
Syne4Q8CII8 Gm28467-201ENSMUST00000190981 318 ntBASIC7.16□□□□□ -1.26
Syne4Q8CII8 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC7.16□□□□□ -1.26
Syne4Q8CII8 Gm7890-201ENSMUST00000204877 601 ntBASIC7.16□□□□□ -1.26
Syne4Q8CII8 Gm44795-201ENSMUST00000205496 319 ntBASIC7.16□□□□□ -1.26
Syne4Q8CII8 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC7.16□□□□□ -1.26
Syne4Q8CII8 Gm7780-201ENSMUST00000214787 406 ntBASIC7.16□□□□□ -1.26
Syne4Q8CII8 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC7.16□□□□□ -1.26
Syne4Q8CII8 Prl7a1-203ENSMUST00000224852 1283 ntBASIC7.16□□□□□ -1.26
Syne4Q8CII8 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Syne4Q8CII8 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
Syne4Q8CII8 Gm26063-201ENSMUST00000083378 107 ntBASIC7.16□□□□□ -1.26
Syne4Q8CII8 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Syne4Q8CII8 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC7.16□□□□□ -1.26
Syne4Q8CII8 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC7.16□□□□□ -1.26
Syne4Q8CII8 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC7.16□□□□□ -1.26
Syne4Q8CII8 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC7.16□□□□□ -1.26
Syne4Q8CII8 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Syne4Q8CII8 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Syne4Q8CII8 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Syne4Q8CII8 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Syne4Q8CII8 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Syne4Q8CII8 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Syne4Q8CII8 AC105407.2-205ENSMUST00000224680 2733 ntBASIC7.15□□□□□ -1.26
Syne4Q8CII8 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC7.15□□□□□ -1.26
Syne4Q8CII8 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Syne4Q8CII8 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Syne4Q8CII8 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Syne4Q8CII8 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Syne4Q8CII8 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Syne4Q8CII8 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Syne4Q8CII8 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Syne4Q8CII8 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Syne4Q8CII8 Gm23910-201ENSMUST00000104597 132 ntBASIC7.15□□□□□ -1.26
Syne4Q8CII8 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Syne4Q8CII8 Gm16149-201ENSMUST00000117631 309 ntBASIC7.15□□□□□ -1.26
Syne4Q8CII8 Gm12937-201ENSMUST00000118333 448 ntBASIC7.15□□□□□ -1.26
Syne4Q8CII8 Gm14521-201ENSMUST00000119545 350 ntBASIC7.15□□□□□ -1.26
Syne4Q8CII8 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC7.15□□□□□ -1.26
Syne4Q8CII8 Gm6808-201ENSMUST00000162341 807 ntBASIC7.15□□□□□ -1.26
Syne4Q8CII8 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Syne4Q8CII8 Mir6362-201ENSMUST00000184329 107 ntBASIC7.15□□□□□ -1.26
Syne4Q8CII8 Gm3605-201ENSMUST00000185858 440 ntBASIC7.15□□□□□ -1.26
Syne4Q8CII8 Gm8506-201ENSMUST00000186661 829 ntBASIC7.15□□□□□ -1.26
Syne4Q8CII8 Gm28665-201ENSMUST00000189269 670 ntBASIC7.15□□□□□ -1.26
Syne4Q8CII8 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC7.15□□□□□ -1.26
Syne4Q8CII8 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC7.15□□□□□ -1.26
Syne4Q8CII8 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Syne4Q8CII8 Gm9237-201ENSMUST00000221499 548 ntBASIC7.15□□□□□ -1.26
Syne4Q8CII8 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC7.15□□□□□ -1.26
Syne4Q8CII8 Gm36501-201ENSMUST00000221857 745 ntBASIC7.15□□□□□ -1.26
Syne4Q8CII8 AC122924.1-201ENSMUST00000222044 163 ntBASIC7.15□□□□□ -1.26
Syne4Q8CII8 AC158525.1-201ENSMUST00000223806 576 ntBASIC7.15□□□□□ -1.26
Syne4Q8CII8 AC165092.4-201ENSMUST00000225025 679 ntBASIC7.15□□□□□ -1.26
Syne4Q8CII8 AC096628.1-201ENSMUST00000226060 641 ntBASIC7.15□□□□□ -1.26
Syne4Q8CII8 AC107711.2-203ENSMUST00000227827 762 ntBASIC7.15□□□□□ -1.26
Syne4Q8CII8 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Syne4Q8CII8 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Syne4Q8CII8 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Syne4Q8CII8 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Syne4Q8CII8 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Syne4Q8CII8 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Syne4Q8CII8 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC7.15□□□□□ -1.27
Syne4Q8CII8 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC7.15□□□□□ -1.27
Syne4Q8CII8 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Syne4Q8CII8 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Syne4Q8CII8 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Syne4Q8CII8 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Syne4Q8CII8 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC7.15□□□□□ -1.27
Syne4Q8CII8 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Syne4Q8CII8 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Syne4Q8CII8 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Syne4Q8CII8 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC7.15□□□□□ -1.27
Syne4Q8CII8 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Syne4Q8CII8 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms