Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Gm14367-201ENSMUST00000119214 1497 ntBASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Gm42892-201ENSMUST00000196227 3973 ntBASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Gm25093-201ENSMUST00000103993 132 ntBASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Gm23748-201ENSMUST00000104227 131 ntBASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Gm11433-201ENSMUST00000118318 228 ntBASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Gm15621-201ENSMUST00000119162 364 ntBASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Gm7867-201ENSMUST00000189856 546 ntBASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Gm18348-201ENSMUST00000191227 820 ntBASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Gm36943-201ENSMUST00000194422 282 ntBASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Gm5027-201ENSMUST00000206700 375 ntBASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Gm18599-201ENSMUST00000206729 1125 ntBASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 CT030124.1-201ENSMUST00000217130 235 ntBASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 AC125064.1-201ENSMUST00000225801 295 ntBASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 AC124395.1-201ENSMUST00000225940 707 ntBASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Mir7b-201ENSMUST00000083557 111 ntBASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc87Q8CDL9 AC151904.1-201ENSMUST00000219945 1498 ntBASIC6.85□□□□□ -1.31
Ccdc87Q8CDL9 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ccdc87Q8CDL9 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ccdc87Q8CDL9 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Ccdc87Q8CDL9 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ccdc87Q8CDL9 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Ccdc87Q8CDL9 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.85□□□□□ -1.31
Ccdc87Q8CDL9 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ccdc87Q8CDL9 Gm43842-201ENSMUST00000202890 2982 ntBASIC6.85□□□□□ -1.31
Ccdc87Q8CDL9 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC6.85□□□□□ -1.31
Ccdc87Q8CDL9 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.85□□□□□ -1.31
Ccdc87Q8CDL9 Phxr4-202ENSMUST00000216590 1391 ntBASIC6.85□□□□□ -1.31
Ccdc87Q8CDL9 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.85□□□□□ -1.31
Ccdc87Q8CDL9 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC6.85□□□□□ -1.31
Ccdc87Q8CDL9 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ccdc87Q8CDL9 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ccdc87Q8CDL9 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Ccdc87Q8CDL9 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Ccdc87Q8CDL9 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC6.85□□□□□ -1.31
Ccdc87Q8CDL9 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC6.85□□□□□ -1.31
Ccdc87Q8CDL9 Gm15103-201ENSMUST00000119893 871 ntBASIC6.85□□□□□ -1.31
Ccdc87Q8CDL9 Gm12804-201ENSMUST00000121030 999 ntBASIC6.85□□□□□ -1.31
Ccdc87Q8CDL9 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC6.85□□□□□ -1.31
Ccdc87Q8CDL9 Gm16359-201ENSMUST00000124511 289 ntBASIC6.85□□□□□ -1.31
Ccdc87Q8CDL9 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC6.85□□□□□ -1.31
Ccdc87Q8CDL9 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC6.85□□□□□ -1.31
Ccdc87Q8CDL9 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC6.85□□□□□ -1.31
Ccdc87Q8CDL9 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC6.85□□□□□ -1.31
Ccdc87Q8CDL9 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC6.85□□□□□ -1.31
Ccdc87Q8CDL9 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ccdc87Q8CDL9 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC6.85□□□□□ -1.31
Ccdc87Q8CDL9 Gm22820-201ENSMUST00000157205 329 ntBASIC6.85□□□□□ -1.31
Ccdc87Q8CDL9 Gm8323-201ENSMUST00000168436 1201 ntBASIC6.85□□□□□ -1.31
Ccdc87Q8CDL9 Gm4904-201ENSMUST00000178243 1195 ntBASIC6.85□□□□□ -1.31
Ccdc87Q8CDL9 Gm2871-201ENSMUST00000179984 1204 ntBASIC6.85□□□□□ -1.31
Ccdc87Q8CDL9 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ccdc87Q8CDL9 Mir7046-201ENSMUST00000183435 66 ntBASIC6.85□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms