Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm9226-201ENSMUST00000188352 3489 ntBASIC7.41□□□□□ -1.22
Vps53Q8CCB4 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Vps53Q8CCB4 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Vps53Q8CCB4 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Vps53Q8CCB4 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Vps53Q8CCB4 Gm43180-201ENSMUST00000197541 2886 ntBASIC7.41□□□□□ -1.22
Vps53Q8CCB4 Gm43176-201ENSMUST00000199653 2989 ntBASIC7.41□□□□□ -1.22
Vps53Q8CCB4 Gm43496-201ENSMUST00000201682 3001 ntBASIC7.41□□□□□ -1.22
Vps53Q8CCB4 Gm42613-201ENSMUST00000199975 1931 ntBASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Gm14900-201ENSMUST00000120304 733 ntBASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Gm12890-201ENSMUST00000120885 373 ntBASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Gm12372-201ENSMUST00000121654 768 ntBASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Gm21990-201ENSMUST00000124692 383 ntBASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Gm11545-201ENSMUST00000146507 375 ntBASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Gm25219-201ENSMUST00000157545 330 ntBASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Gm17048-201ENSMUST00000179266 847 ntBASIC7.4□□□□□ -1.22
Vps53Q8CCB4 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Gm28527-201ENSMUST00000185210 297 ntBASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Scgb2b33-201ENSMUST00000187413 334 ntBASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Gm28877-201ENSMUST00000191349 604 ntBASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Ass-ps1-201ENSMUST00000197717 761 ntBASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Igkv12-67-201ENSMUST00000197806 354 ntBASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Gm43233-201ENSMUST00000200491 616 ntBASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Gm5324-201ENSMUST00000208115 476 ntBASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Gm45734-201ENSMUST00000211916 411 ntBASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Gm7780-201ENSMUST00000214787 406 ntBASIC7.4□□□□□ -1.22
Vps53Q8CCB4 AC115793.1-201ENSMUST00000216605 215 ntBASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Vps53Q8CCB4 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Vps53Q8CCB4 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC7.4□□□□□ -1.22
Vps53Q8CCB4 AC154612.1-202ENSMUST00000224806 1725 ntBASIC7.4□□□□□ -1.23
Vps53Q8CCB4 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Vps53Q8CCB4 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Vps53Q8CCB4 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Vps53Q8CCB4 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.23
Vps53Q8CCB4 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC7.4□□□□□ -1.23
Vps53Q8CCB4 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
Vps53Q8CCB4 AC160028.2-201ENSMUST00000218937 2519 ntBASIC7.4□□□□□ -1.23
Vps53Q8CCB4 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Vps53Q8CCB4 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Vps53Q8CCB4 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Vps53Q8CCB4 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
Vps53Q8CCB4 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Nsd1-207ENSMUST00000224973 9905 ntBASIC7.39□□□□□ -1.23
Vps53Q8CCB4 AC163032.1-201ENSMUST00000220671 2970 ntBASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Gm37913-201ENSMUST00000192925 2544 ntBASIC7.39□□□□□ -1.23
Vps53Q8CCB4 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Gm11256-201ENSMUST00000118109 829 ntBASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Gm13604-201ENSMUST00000119332 482 ntBASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Gm11787-201ENSMUST00000121996 1050 ntBASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Gm15300-201ENSMUST00000122324 279 ntBASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Gm3810-201ENSMUST00000122413 476 ntBASIC7.39□□□□□ -1.23
Vps53Q8CCB4 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Gm6542-201ENSMUST00000153606 772 ntBASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Gm17044-201ENSMUST00000168549 828 ntBASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Gm8895-201ENSMUST00000172300 1223 ntBASIC7.39□□□□□ -1.23
Vps53Q8CCB4 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Gm19791-201ENSMUST00000180398 859 ntBASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Mir6367-201ENSMUST00000183385 102 ntBASIC7.39□□□□□ -1.23
Vps53Q8CCB4 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC7.39□□□□□ -1.23
Vps53Q8CCB4 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC7.39□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms