Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm6185-202ENSMUST00000212885 2692 ntTSL 5 BASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Gm43019-201ENSMUST00000196948 2863 ntBASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 AC098728.1-202ENSMUST00000226656 2198 ntBASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Gm45290-201ENSMUST00000211177 3890 ntBASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Gm43421-201ENSMUST00000200044 2905 ntBASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Gm45221-201ENSMUST00000207822 2272 ntBASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Gm22895-201ENSMUST00000157508 308 ntBASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Gm44940-201ENSMUST00000206225 1247 ntBASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 AC161884.2-201ENSMUST00000224513 227 ntBASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 CT030254.1-201ENSMUST00000225450 1078 ntBASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 CT030645.3-201ENSMUST00000225483 1022 ntBASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Gm45017-201ENSMUST00000206842 1777 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Gm38120-201ENSMUST00000195506 4642 ntBASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Gm37022-201ENSMUST00000192517 2254 ntBASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Gm5073-201ENSMUST00000118222 820 ntBASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Mrgpra14-201ENSMUST00000189782 913 ntBASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Gm5306-201ENSMUST00000203325 757 ntBASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Gm18705-201ENSMUST00000215985 913 ntBASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 AC154556.1-201ENSMUST00000224587 885 ntBASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 AC174459.1-201ENSMUST00000224476 1943 ntBASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 AC131747.2-201ENSMUST00000226121 1895 ntBASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Gm12919-201ENSMUST00000119855 1594 ntBASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Gm23280-201ENSMUST00000157905 139 ntBASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Gm16112-201ENSMUST00000159075 382 ntBASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Gm29596-201ENSMUST00000185710 385 ntBASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Gm7890-201ENSMUST00000204877 601 ntBASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Gm44213-201ENSMUST00000204977 703 ntBASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Gm45249-201ENSMUST00000211021 348 ntBASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Gm33242-201ENSMUST00000212130 1057 ntBASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 AV026068-231ENSMUST00000225862 482 ntBASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 AC166369.2-201ENSMUST00000228403 308 ntBASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Olfr686-204ENSMUST00000216613 2613 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a6Q8C6K9 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms