Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm25397-201ENSMUST00000176951 92 ntBASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Gm21815-201ENSMUST00000178213 664 ntBASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Gm5787-201ENSMUST00000183049 1038 ntBASIC8.14□□□□□ -1.11
Trim47Q8C0E3 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim47Q8C0E3 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Gm5305-201ENSMUST00000204010 746 ntBASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Gm2767-201ENSMUST00000209582 473 ntBASIC8.14□□□□□ -1.11
Trim47Q8C0E3 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim47Q8C0E3 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC8.14□□□□□ -1.11
Trim47Q8C0E3 AC102291.1-201ENSMUST00000227164 529 ntBASIC8.14□□□□□ -1.11
Trim47Q8C0E3 AC101205.1-201ENSMUST00000227916 907 ntBASIC8.14□□□□□ -1.11
Trim47Q8C0E3 BC055308-201ENSMUST00000193380 2538 ntBASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Gm37043-201ENSMUST00000194609 3105 ntBASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Gm37356-201ENSMUST00000193362 1613 ntBASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Inpp5d-208ENSMUST00000167032 4125 ntTSL 2 BASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Olfr744-202ENSMUST00000213668 2583 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Slc41a2-201ENSMUST00000039956 4742 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim47Q8C0E3 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Gm23437-201ENSMUST00000104036 127 ntBASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Gm24430-201ENSMUST00000104077 104 ntBASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Gm13545-201ENSMUST00000119044 482 ntBASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Gm14600-201ENSMUST00000121032 630 ntBASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Gm13489-201ENSMUST00000121234 971 ntBASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim47Q8C0E3 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Gm25180-201ENSMUST00000157746 115 ntBASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Gm21392-201ENSMUST00000182950 972 ntBASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Gm8367-201ENSMUST00000186145 887 ntBASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Gm28625-201ENSMUST00000188309 205 ntBASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Gm28416-201ENSMUST00000188334 292 ntBASIC8.13□□□□□ -1.11
Trim47Q8C0E3 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Gm36953-201ENSMUST00000195295 268 ntBASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Mir6375-201ENSMUST00000197176 95 ntBASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Gm18855-201ENSMUST00000206689 570 ntBASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim47Q8C0E3 AC133948.2-201ENSMUST00000217850 378 ntBASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Gm19217-201ENSMUST00000218238 328 ntBASIC8.13□□□□□ -1.11
Trim47Q8C0E3 AC167140.1-201ENSMUST00000224710 403 ntBASIC8.13□□□□□ -1.11
Trim47Q8C0E3 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Gm25578-201ENSMUST00000083406 104 ntBASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Gm37984-201ENSMUST00000191641 3733 ntBASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Zfp473-207ENSMUST00000149011 9230 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim47Q8C0E3 Ndufb8-209ENSMUST00000171415 2142 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Gm44769-201ENSMUST00000206120 2809 ntBASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Gm37022-201ENSMUST00000192517 2254 ntBASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Gm43429-201ENSMUST00000197889 2251 ntBASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Snord65-201ENSMUST00000104269 72 ntBASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Gm5752-201ENSMUST00000117771 594 ntBASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Gm13878-201ENSMUST00000117986 577 ntBASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Gm11843-201ENSMUST00000118984 425 ntBASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC8.12□□□□□ -1.11
Trim47Q8C0E3 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms