Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Gm43285-201ENSMUST00000196563 3592 ntBASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Gm23739-201ENSMUST00000102295 108 ntBASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Gm22714-201ENSMUST00000116894 78 ntBASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Gm11318-201ENSMUST00000118640 961 ntBASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Gm22518-201ENSMUST00000158267 68 ntBASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Gm8837-201ENSMUST00000161037 1107 ntBASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Gm25246-201ENSMUST00000175476 69 ntBASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Gm15257-201ENSMUST00000177680 883 ntBASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Gm15252-201ENSMUST00000177750 883 ntBASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Gm15256-201ENSMUST00000177793 883 ntBASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Gm23450-201ENSMUST00000178285 91 ntBASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Gm15260-201ENSMUST00000179402 883 ntBASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Gm18952-201ENSMUST00000194471 846 ntBASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Gm6590-201ENSMUST00000203343 687 ntBASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 AC155941.3-201ENSMUST00000218476 308 ntBASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 AC114572.1-201ENSMUST00000227262 300 ntBASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Gm37953-201ENSMUST00000195293 1884 ntBASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Gm42544-201ENSMUST00000197868 3242 ntBASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Gm37423-201ENSMUST00000194246 3342 ntBASIC6.42□□□□□ -1.38
Sh3rf2Q8BZT2 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 Gm11624-201ENSMUST00000118579 1041 ntBASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 Gm1866-201ENSMUST00000120701 477 ntBASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 Gm25065-201ENSMUST00000177914 132 ntBASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 Gm25891-201ENSMUST00000180050 132 ntBASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 Mir6911-201ENSMUST00000184241 69 ntBASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 Mir6361-201ENSMUST00000185079 101 ntBASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 Gm8860-201ENSMUST00000193160 445 ntBASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 Gm44332-201ENSMUST00000203712 433 ntBASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 Gm19095-201ENSMUST00000220533 730 ntBASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 AC154633.1-201ENSMUST00000223276 449 ntBASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 AC154634.2-201ENSMUST00000225983 1184 ntBASIC6.41□□□□□ -1.38
Sh3rf2Q8BZT2 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC6.41□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms