Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC8.65□□□□□ -1.02
Usp40Q8BWR4 Gm37511-201ENSMUST00000192901 294 ntBASIC8.65□□□□□ -1.02
Usp40Q8BWR4 Gm6631-201ENSMUST00000193699 559 ntBASIC8.65□□□□□ -1.02
Usp40Q8BWR4 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Usp40Q8BWR4 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Usp40Q8BWR4 Gm35013-201ENSMUST00000197218 832 ntBASIC8.65□□□□□ -1.02
Usp40Q8BWR4 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC8.65□□□□□ -1.02
Usp40Q8BWR4 Gm18996-201ENSMUST00000214851 755 ntBASIC8.65□□□□□ -1.02
Usp40Q8BWR4 AC211878.6-201ENSMUST00000221896 358 ntBASIC8.65□□□□□ -1.02
Usp40Q8BWR4 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC8.65□□□□□ -1.02
Usp40Q8BWR4 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Usp40Q8BWR4 Gm22300-201ENSMUST00000082661 126 ntBASIC8.65□□□□□ -1.02
Usp40Q8BWR4 AC154406.1-201ENSMUST00000215220 2529 ntBASIC8.65□□□□□ -1.02
Usp40Q8BWR4 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC8.65□□□□□ -1.02
Usp40Q8BWR4 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Usp40Q8BWR4 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Usp40Q8BWR4 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Usp40Q8BWR4 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC8.65□□□□□ -1.03
Usp40Q8BWR4 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Usp40Q8BWR4 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.03
Usp40Q8BWR4 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC8.65□□□□□ -1.03
Usp40Q8BWR4 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Usp40Q8BWR4 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Usp40Q8BWR4 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Usp40Q8BWR4 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Usp40Q8BWR4 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Usp40Q8BWR4 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC8.64□□□□□ -1.03
Usp40Q8BWR4 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Usp40Q8BWR4 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC8.64□□□□□ -1.03
Usp40Q8BWR4 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Usp40Q8BWR4 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Usp40Q8BWR4 Gm25317-201ENSMUST00000116824 129 ntBASIC8.64□□□□□ -1.03
Usp40Q8BWR4 Gm14975-201ENSMUST00000118741 664 ntBASIC8.64□□□□□ -1.03
Usp40Q8BWR4 Gm14331-201ENSMUST00000120396 409 ntBASIC8.64□□□□□ -1.03
Usp40Q8BWR4 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC8.64□□□□□ -1.03
Usp40Q8BWR4 Gm13998-201ENSMUST00000120952 335 ntBASIC8.64□□□□□ -1.03
Usp40Q8BWR4 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Usp40Q8BWR4 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Usp40Q8BWR4 Gm17847-201ENSMUST00000188261 1127 ntBASIC8.64□□□□□ -1.03
Usp40Q8BWR4 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC8.64□□□□□ -1.03
Usp40Q8BWR4 Gm37337-201ENSMUST00000192601 993 ntBASIC8.64□□□□□ -1.03
Usp40Q8BWR4 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Usp40Q8BWR4 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Usp40Q8BWR4 Gm44768-201ENSMUST00000205719 393 ntBASIC8.64□□□□□ -1.03
Usp40Q8BWR4 Gm45196-201ENSMUST00000206751 825 ntBASIC8.64□□□□□ -1.03
Usp40Q8BWR4 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC8.64□□□□□ -1.03
Usp40Q8BWR4 Gm19572-201ENSMUST00000214326 338 ntBASIC8.64□□□□□ -1.03
Usp40Q8BWR4 Gm4510-201ENSMUST00000218265 427 ntBASIC8.64□□□□□ -1.03
Usp40Q8BWR4 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC8.64□□□□□ -1.03
Usp40Q8BWR4 AC132954.2-201ENSMUST00000222400 403 ntBASIC8.64□□□□□ -1.03
Usp40Q8BWR4 AC102352.1-201ENSMUST00000224187 582 ntBASIC8.64□□□□□ -1.03
Usp40Q8BWR4 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Usp40Q8BWR4 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Usp40Q8BWR4 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Usp40Q8BWR4 Gm2531-201ENSMUST00000075609 512 ntBASIC8.64□□□□□ -1.03
Usp40Q8BWR4 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Usp40Q8BWR4 Gm37423-201ENSMUST00000194246 3342 ntBASIC8.64□□□□□ -1.03
Usp40Q8BWR4 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Usp40Q8BWR4 Gm43581-201ENSMUST00000196766 2864 ntBASIC8.64□□□□□ -1.03
Usp40Q8BWR4 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Usp40Q8BWR4 AC153152.1-201ENSMUST00000221105 2742 ntBASIC8.64□□□□□ -1.03
Usp40Q8BWR4 CT010577.1-202ENSMUST00000226187 1903 ntBASIC8.64□□□□□ -1.03
Usp40Q8BWR4 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Usp40Q8BWR4 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC8.64□□□□□ -1.03
Usp40Q8BWR4 AC156025.2-201ENSMUST00000225907 1533 ntBASIC8.64□□□□□ -1.03
Usp40Q8BWR4 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Usp40Q8BWR4 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Usp40Q8BWR4 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Usp40Q8BWR4 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Usp40Q8BWR4 Gm17167-201ENSMUST00000169242 5054 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Gm30340-201ENSMUST00000191898 2198 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Gm10258-201ENSMUST00000091270 2123 ntBASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC8.63□□□□□ -1.03
Usp40Q8BWR4 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Gm44046-201ENSMUST00000203145 2678 ntBASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Gm44897-201ENSMUST00000206187 1341 ntBASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Gm12193-201ENSMUST00000117250 379 ntBASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Gm7189-201ENSMUST00000119811 429 ntBASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Gm15237-201ENSMUST00000122104 469 ntBASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Gm14457-201ENSMUST00000148069 1161 ntBASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Gm22210-201ENSMUST00000158101 144 ntBASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Gm19560-201ENSMUST00000177510 514 ntBASIC8.63□□□□□ -1.03
Usp40Q8BWR4 V1rg10-201ENSMUST00000183378 937 ntBASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Gm27845-201ENSMUST00000184479 114 ntBASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Gm27219-201ENSMUST00000184633 742 ntBASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Gm37599-201ENSMUST00000193067 489 ntBASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Gm8863-201ENSMUST00000216630 926 ntBASIC8.63□□□□□ -1.03
Usp40Q8BWR4 AC132237.2-201ENSMUST00000221702 1209 ntBASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC8.63□□□□□ -1.03
Usp40Q8BWR4 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms