Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm10705-201ENSMUST00000098980 461 ntBASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm43523-201ENSMUST00000197397 2878 ntBASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 AC159896.3-201ENSMUST00000215904 3835 ntBASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Gm37212-201ENSMUST00000192582 3650 ntBASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Gm15078-201ENSMUST00000118371 782 ntBASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Gm18342-201ENSMUST00000186987 694 ntBASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Gm18350-201ENSMUST00000187395 955 ntBASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Gm28186-201ENSMUST00000187447 679 ntBASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Gm29650-201ENSMUST00000188485 742 ntBASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Gm2427-201ENSMUST00000189121 881 ntBASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Gm38068-201ENSMUST00000192546 540 ntBASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Ighv1-30-201ENSMUST00000194082 349 ntBASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 AC122533.1-201ENSMUST00000225177 767 ntBASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Gm43031-201ENSMUST00000198500 1887 ntBASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Gm7048-201ENSMUST00000199395 1891 ntBASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Gm37833-201ENSMUST00000194342 3256 ntBASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Gm15789-201ENSMUST00000118992 1359 ntBASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Gm6818-201ENSMUST00000190556 2558 ntBASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 CT009480.3-201ENSMUST00000224051 3032 ntBASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc40Q8BI79 Gm43386-201ENSMUST00000199654 4001 ntBASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Gm24989-201ENSMUST00000104461 88 ntBASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Gm11920-201ENSMUST00000118491 563 ntBASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Gm15750-201ENSMUST00000120970 616 ntBASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Gm22276-201ENSMUST00000122469 129 ntBASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Gm25281-201ENSMUST00000157270 104 ntBASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Gm23674-201ENSMUST00000157473 131 ntBASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Gm26509-201ENSMUST00000180947 948 ntBASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Gm27601-201ENSMUST00000184794 127 ntBASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Gm38291-201ENSMUST00000193671 259 ntBASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Gm29784-201ENSMUST00000196217 406 ntBASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Gm43063-201ENSMUST00000198198 1081 ntBASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Gm8479-201ENSMUST00000203825 718 ntBASIC6.54□□□□□ -1.36
Ccdc40Q8BI79 Gm44770-201ENSMUST00000205395 1264 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms