Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Gm37310-201ENSMUST00000195237 2968 ntBASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Gm43864-201ENSMUST00000204452 4028 ntBASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Gm24048-201ENSMUST00000102411 106 ntBASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Gm12073-201ENSMUST00000117382 524 ntBASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Gm15801-201ENSMUST00000120920 522 ntBASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Gm22724-201ENSMUST00000158091 127 ntBASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Gm23408-201ENSMUST00000158523 265 ntBASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Gm8783-201ENSMUST00000159764 522 ntBASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Gm38181-201ENSMUST00000181357 720 ntBASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Gm28080-201ENSMUST00000188552 722 ntBASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Gm20770-201ENSMUST00000193474 694 ntBASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Gm17937-201ENSMUST00000197908 742 ntBASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Gm7048-201ENSMUST00000199395 1891 ntBASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Gm43421-201ENSMUST00000200044 2905 ntBASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Gm19269-201ENSMUST00000211401 804 ntBASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 AC153968.2-201ENSMUST00000215579 1140 ntBASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 AC122251.2-201ENSMUST00000227341 603 ntBASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Gm5582-201ENSMUST00000075251 522 ntBASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ddx55Q6ZPL9 Gm37790-201ENSMUST00000193136 3346 ntBASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Gm15011-201ENSMUST00000117724 1480 ntBASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Gm4991-201ENSMUST00000118899 1552 ntBASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Gm5832-201ENSMUST00000121704 1582 ntBASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 AC192333.5-201ENSMUST00000224620 2350 ntBASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Gm11984-201ENSMUST00000118142 766 ntBASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Gm15237-201ENSMUST00000122104 469 ntBASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Gm25057-201ENSMUST00000157366 88 ntBASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Gm22690-201ENSMUST00000175054 110 ntBASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Mir3572-201ENSMUST00000175549 86 ntBASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Gm27006-201ENSMUST00000182218 943 ntBASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Gm8930-201ENSMUST00000201693 768 ntBASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Gm19182-201ENSMUST00000207139 577 ntBASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Gm5080-201ENSMUST00000220341 743 ntBASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 CU024892.1-201ENSMUST00000224869 515 ntBASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 CT025667.1-201ENSMUST00000225872 382 ntBASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 AC124709.3-201ENSMUST00000227294 171 ntBASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Gm6776-201ENSMUST00000057752 900 ntBASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 n-R5s36-201ENSMUST00000082998 119 ntBASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 AC144772.2-201ENSMUST00000228830 2859 ntBASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Gm38322-201ENSMUST00000194074 2300 ntBASIC7.3□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms