Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Skp2-202ENSMUST00000110585 6185 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
AtmQ62388 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC5.64□□□□□ -1.51
AtmQ62388 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
AtmQ62388 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
AtmQ62388 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
AtmQ62388 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
AtmQ62388 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 Olfr1532-ps1-202ENSMUST00000207492 2414 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
AtmQ62388 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC5.63□□□□□ -1.51
AtmQ62388 Gm22094-201ENSMUST00000158976 117 ntBASIC5.63□□□□□ -1.51
AtmQ62388 Gm6061-201ENSMUST00000175860 492 ntBASIC5.63□□□□□ -1.51
AtmQ62388 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC5.63□□□□□ -1.51
AtmQ62388 Gm3257-201ENSMUST00000207217 675 ntBASIC5.63□□□□□ -1.51
AtmQ62388 CT025667.1-201ENSMUST00000225872 382 ntBASIC5.63□□□□□ -1.51
AtmQ62388 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
AtmQ62388 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
AtmQ62388 Inpp1-201ENSMUST00000027271 5767 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
AtmQ62388 Gm5925-201ENSMUST00000105016 1497 ntBASIC5.63□□□□□ -1.51
AtmQ62388 Gm19656-201ENSMUST00000208543 4610 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
AtmQ62388 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
AtmQ62388 Dysf-215ENSMUST00000204591 6641 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
AtmQ62388 Gm37233-201ENSMUST00000192173 6263 ntBASIC5.63□□□□□ -1.51
AtmQ62388 Gm38387-201ENSMUST00000191945 2577 ntBASIC5.63□□□□□ -1.51
AtmQ62388 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
AtmQ62388 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
AtmQ62388 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
AtmQ62388 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
AtmQ62388 Gm43162-201ENSMUST00000198292 1770 ntBASIC5.63□□□□□ -1.51
AtmQ62388 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
AtmQ62388 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
AtmQ62388 Gm25292-201ENSMUST00000122797 322 ntBASIC5.63□□□□□ -1.51
AtmQ62388 Gm22552-201ENSMUST00000157796 337 ntBASIC5.63□□□□□ -1.51
AtmQ62388 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
AtmQ62388 Gm7609-204ENSMUST00000161424 461 ntBASIC5.63□□□□□ -1.51
AtmQ62388 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC5.63□□□□□ -1.51
AtmQ62388 Gm27690-201ENSMUST00000184596 126 ntBASIC5.63□□□□□ -1.51
AtmQ62388 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC5.63□□□□□ -1.51
AtmQ62388 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC5.63□□□□□ -1.51
AtmQ62388 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC5.63□□□□□ -1.51
AtmQ62388 Gm43981-201ENSMUST00000203285 1467 ntBASIC5.63□□□□□ -1.51
AtmQ62388 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
AtmQ62388 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
AtmQ62388 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC5.63□□□□□ -1.51
AtmQ62388 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
AtmQ62388 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
AtmQ62388 Gm5844-201ENSMUST00000119417 2191 ntBASIC5.63□□□□□ -1.51
AtmQ62388 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC5.63□□□□□ -1.51
AtmQ62388 Gm42436-201ENSMUST00000198804 3656 ntBASIC5.63□□□□□ -1.51
AtmQ62388 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
AtmQ62388 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
AtmQ62388 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
AtmQ62388 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
AtmQ62388 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
AtmQ62388 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
AtmQ62388 Eya3-202ENSMUST00000079157 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
AtmQ62388 Gm13818-201ENSMUST00000119441 511 ntBASIC5.63□□□□□ -1.51
AtmQ62388 Gm13737-201ENSMUST00000119793 232 ntBASIC5.63□□□□□ -1.51
AtmQ62388 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC5.63□□□□□ -1.51
AtmQ62388 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
AtmQ62388 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC5.63□□□□□ -1.51
AtmQ62388 Gm44539-201ENSMUST00000206010 238 ntBASIC5.63□□□□□ -1.51
AtmQ62388 AC158955.1-201ENSMUST00000227140 385 ntBASIC5.63□□□□□ -1.51
AtmQ62388 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
AtmQ62388 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
AtmQ62388 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
AtmQ62388 Depdc5-202ENSMUST00000087897 8216 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
AtmQ62388 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC5.62□□□□□ -1.51
AtmQ62388 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
AtmQ62388 Gm45177-201ENSMUST00000209104 2307 ntBASIC5.62□□□□□ -1.51
AtmQ62388 Gm37367-201ENSMUST00000191771 2602 ntBASIC5.62□□□□□ -1.51
AtmQ62388 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC5.62□□□□□ -1.51
AtmQ62388 Gm5387-201ENSMUST00000119776 857 ntBASIC5.62□□□□□ -1.51
AtmQ62388 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC5.62□□□□□ -1.51
AtmQ62388 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC5.62□□□□□ -1.51
AtmQ62388 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
AtmQ62388 Gm8826-201ENSMUST00000193161 948 ntBASIC5.62□□□□□ -1.51
AtmQ62388 Gm19174-201ENSMUST00000216944 956 ntBASIC5.62□□□□□ -1.51
AtmQ62388 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
AtmQ62388 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
AtmQ62388 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
AtmQ62388 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
AtmQ62388 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
AtmQ62388 Gm44255-201ENSMUST00000203456 2053 ntBASIC5.62□□□□□ -1.51
AtmQ62388 Gm6101-201ENSMUST00000195384 1867 ntBASIC5.62□□□□□ -1.51
AtmQ62388 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
AtmQ62388 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
AtmQ62388 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC5.62□□□□□ -1.51
AtmQ62388 Sv2c-201ENSMUST00000161263 9101 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
AtmQ62388 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
AtmQ62388 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
AtmQ62388 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC5.62□□□□□ -1.51
AtmQ62388 Mir449a-201ENSMUST00000083641 91 ntBASIC5.62□□□□□ -1.51
AtmQ62388 Slc24a1-201ENSMUST00000037798 5213 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
AtmQ62388 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms