Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim41Q5NCC3 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC12.77□□□□□ -0.37
Trim41Q5NCC3 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trim41Q5NCC3 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim41Q5NCC3 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim41Q5NCC3 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim41Q5NCC3 Pbdc1-201ENSMUST00000033577 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim41Q5NCC3 4831440D22Rik-201ENSMUST00000211287 2929 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Olfr524-202ENSMUST00000215815 5044 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Map1a-202ENSMUST00000110639 10145 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Vwde-202ENSMUST00000203074 5626 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Mir546-201ENSMUST00000102105 121 ntBASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Snord65-201ENSMUST00000104269 72 ntBASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Gm11746-201ENSMUST00000119843 821 ntBASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Gm14125-202ENSMUST00000120921 756 ntBASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Gm15507-203ENSMUST00000140958 658 ntTSL 3 BASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Gm23981-201ENSMUST00000157136 106 ntBASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Gm17155-201ENSMUST00000165969 473 ntBASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Gm6726-201ENSMUST00000172786 681 ntBASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Gm15257-201ENSMUST00000177680 883 ntBASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Gm15252-201ENSMUST00000177750 883 ntBASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Gm15260-201ENSMUST00000179402 883 ntBASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Mir7033-201ENSMUST00000184259 81 ntBASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Gm38075-201ENSMUST00000191979 920 ntBASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Gm43096-201ENSMUST00000196173 421 ntBASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Igkv12-47-201ENSMUST00000196961 356 ntBASIC12.76□□□□□ -0.37
Trim41Q5NCC3 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Gm2089-201ENSMUST00000218294 479 ntBASIC12.76□□□□□ -0.37
Trim41Q5NCC3 AC122301.1-201ENSMUST00000219625 507 ntBASIC12.76□□□□□ -0.37
Trim41Q5NCC3 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Gm26163-201ENSMUST00000083792 178 ntBASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Plec-207ENSMUST00000076442 15439 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Gm39041-201ENSMUST00000205557 3902 ntBASIC12.76□□□□□ -0.37
Trim41Q5NCC3 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Gm36908-201ENSMUST00000218080 1662 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Trpm3-201ENSMUST00000037901 5082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Efl1-205ENSMUST00000179489 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Vmn1r44-212ENSMUST00000228183 1838 ntBASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Tmed5-201ENSMUST00000002837 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Pds5b-202ENSMUST00000038900 7315 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trim41Q5NCC3 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Xpnpep2-201ENSMUST00000077775 3498 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Igf1r-201ENSMUST00000005671 11409 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trim41Q5NCC3 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Skp2-202ENSMUST00000110585 6185 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Gm13798-201ENSMUST00000118285 139 ntBASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Gm13482-201ENSMUST00000119842 254 ntBASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Gm12346-201ENSMUST00000121455 2255 ntBASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Gm2892-201ENSMUST00000145537 711 ntBASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Gm37336-201ENSMUST00000192794 760 ntTSL 2 BASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Gm43488-201ENSMUST00000198874 2504 ntBASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Gm7452-201ENSMUST00000200764 788 ntBASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Gm18855-201ENSMUST00000206689 570 ntBASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Ppp2r3c-201ENSMUST00000021410 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim41Q5NCC3 AC131029.2-201ENSMUST00000226696 628 ntBASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Kif14-201ENSMUST00000047817 8770 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trim41Q5NCC3 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Tbc1d24-206ENSMUST00000168410 7683 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Siglec1-201ENSMUST00000028794 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Ddx6-201ENSMUST00000170489 6065 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Zkscan8-201ENSMUST00000045228 8805 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim41Q5NCC3 Myo1e-201ENSMUST00000034745 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Mettl15-201ENSMUST00000081631 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Nhsl2-201ENSMUST00000101339 12971 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Akap2-202ENSMUST00000098064 7172 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Col12a1-201ENSMUST00000071750 11511 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms