Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm18601-201ENSMUST00000220831 634 ntBASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 AC154646.1-201ENSMUST00000225011 1092 ntBASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 Gm9521-201ENSMUST00000206656 1516 ntBASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Upf3bQ3ULL6 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC6.59□□□□□ -1.36
Upf3bQ3ULL6 Gm21122-201ENSMUST00000191548 3452 ntBASIC6.59□□□□□ -1.36
Upf3bQ3ULL6 Gm37078-201ENSMUST00000193314 2009 ntBASIC6.59□□□□□ -1.36
Upf3bQ3ULL6 Gm37289-201ENSMUST00000195409 1402 ntBASIC6.59□□□□□ -1.36
Upf3bQ3ULL6 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.36
Upf3bQ3ULL6 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Gm25564-201ENSMUST00000104604 132 ntBASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Gm13870-201ENSMUST00000117214 1023 ntBASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Gm12094-201ENSMUST00000121781 472 ntBASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Gm12152-201ENSMUST00000122465 684 ntBASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Gm6541-201ENSMUST00000165542 561 ntBASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Gm27998-201ENSMUST00000184902 361 ntBASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Gm29464-201ENSMUST00000187692 513 ntBASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Gm37604-201ENSMUST00000191749 1272 ntBASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Ighv1-45-201ENSMUST00000193677 352 ntBASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Gm37838-201ENSMUST00000194464 312 ntBASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Igkv4-73-201ENSMUST00000199760 358 ntBASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Gm45070-201ENSMUST00000208100 246 ntBASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Gm2614-201ENSMUST00000223227 403 ntBASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Gm36947-201ENSMUST00000194709 2249 ntBASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Wnk1-218ENSMUST00000161512 1426 ntBASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Gm38096-201ENSMUST00000193692 2389 ntBASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Upf3bQ3ULL6 Gm37943-201ENSMUST00000194053 3944 ntBASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Gm44229-201ENSMUST00000203211 2487 ntBASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Gm12654-201ENSMUST00000120387 587 ntBASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Gm14331-201ENSMUST00000120396 409 ntBASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Gm11341-201ENSMUST00000122316 447 ntBASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Gm22701-201ENSMUST00000175371 291 ntBASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 n-R5s209-201ENSMUST00000179494 119 ntBASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Gm29234-201ENSMUST00000187452 1262 ntBASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Gm29111-201ENSMUST00000188823 696 ntBASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Gm28584-201ENSMUST00000191489 696 ntBASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Gm37784-201ENSMUST00000193233 189 ntBASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Gm38138-201ENSMUST00000193274 696 ntBASIC6.57□□□□□ -1.36
Upf3bQ3ULL6 Gm37191-201ENSMUST00000193346 388 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms