Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC5.7□□□□□ -1.5
Scn1bP97952 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn1bP97952 CT025686.2-201ENSMUST00000227898 3315 ntBASIC5.7□□□□□ -1.5
Scn1bP97952 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Scn1bP97952 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Scn1bP97952 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn1bP97952 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Scn1bP97952 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Scn1bP97952 Gm20342-201ENSMUST00000185480 9720 ntBASIC5.7□□□□□ -1.5
Scn1bP97952 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Scn1bP97952 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Scn1bP97952 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn1bP97952 Gm38036-201ENSMUST00000194586 3564 ntBASIC5.7□□□□□ -1.5
Scn1bP97952 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.7□□□□□ -1.5
Scn1bP97952 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Scn1bP97952 Gm44289-201ENSMUST00000204144 1390 ntBASIC5.69□□□□□ -1.5
Scn1bP97952 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC5.69□□□□□ -1.5
Scn1bP97952 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Scn1bP97952 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Scn1bP97952 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Scn1bP97952 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Scn1bP97952 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
Scn1bP97952 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scn1bP97952 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scn1bP97952 Gm43410-201ENSMUST00000197510 2234 ntBASIC5.69□□□□□ -1.5
Scn1bP97952 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scn1bP97952 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Scn1bP97952 Gm9429-201ENSMUST00000117804 868 ntBASIC5.69□□□□□ -1.5
Scn1bP97952 Gm13744-201ENSMUST00000118953 850 ntBASIC5.69□□□□□ -1.5
Scn1bP97952 Gm15780-201ENSMUST00000121283 935 ntBASIC5.69□□□□□ -1.5
Scn1bP97952 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scn1bP97952 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Scn1bP97952 Mir1981-201ENSMUST00000157934 82 ntBASIC5.69□□□□□ -1.5
Scn1bP97952 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Scn1bP97952 Gm22923-201ENSMUST00000174952 110 ntBASIC5.69□□□□□ -1.5
Scn1bP97952 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC5.69□□□□□ -1.5
Scn1bP97952 Mir6367-201ENSMUST00000183385 102 ntBASIC5.69□□□□□ -1.5
Scn1bP97952 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scn1bP97952 Mir6241-201ENSMUST00000184225 103 ntBASIC5.69□□□□□ -1.5
Scn1bP97952 Gm27596-201ENSMUST00000185061 83 ntBASIC5.69□□□□□ -1.5
Scn1bP97952 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC5.69□□□□□ -1.5
Scn1bP97952 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Scn1bP97952 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC5.69□□□□□ -1.5
Scn1bP97952 Gm18445-201ENSMUST00000195502 774 ntBASIC5.69□□□□□ -1.5
Scn1bP97952 Ighv8-15-201ENSMUST00000197770 294 ntBASIC5.69□□□□□ -1.5
Scn1bP97952 Gm18330-201ENSMUST00000199246 547 ntBASIC5.69□□□□□ -1.5
Scn1bP97952 Gm3321-201ENSMUST00000200603 1129 ntBASIC5.69□□□□□ -1.5
Scn1bP97952 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scn1bP97952 Gm9604-201ENSMUST00000211175 433 ntBASIC5.69□□□□□ -1.5
Scn1bP97952 Gm7943-201ENSMUST00000212078 1034 ntBASIC5.69□□□□□ -1.5
Scn1bP97952 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Scn1bP97952 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Scn1bP97952 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC5.69□□□□□ -1.5
Scn1bP97952 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scn1bP97952 CT954323.2-201ENSMUST00000222056 213 ntBASIC5.69□□□□□ -1.5
Scn1bP97952 AC091237.1-201ENSMUST00000224911 637 ntBASIC5.69□□□□□ -1.5
Scn1bP97952 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scn1bP97952 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Scn1bP97952 AW822073-201ENSMUST00000075305 555 ntBASIC5.69□□□□□ -1.5
Scn1bP97952 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Scn1bP97952 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC5.69□□□□□ -1.5
Scn1bP97952 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Scn1bP97952 Mir455-201ENSMUST00000093594 82 ntBASIC5.69□□□□□ -1.5
Scn1bP97952 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scn1bP97952 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scn1bP97952 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scn1bP97952 Gm21846-201ENSMUST00000179257 3073 ntBASIC5.69□□□□□ -1.5
Scn1bP97952 Gm42905-201ENSMUST00000196237 1611 ntBASIC5.69□□□□□ -1.5
Scn1bP97952 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
Scn1bP97952 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scn1bP97952 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scn1bP97952 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Scn1bP97952 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scn1bP97952 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC5.69□□□□□ -1.5
Scn1bP97952 Gm43789-201ENSMUST00000199275 2472 ntBASIC5.69□□□□□ -1.5
Scn1bP97952 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scn1bP97952 Gm45793-201ENSMUST00000207900 1342 ntBASIC5.69□□□□□ -1.5
Scn1bP97952 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC5.69□□□□□ -1.5
Scn1bP97952 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Scn1bP97952 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scn1bP97952 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scn1bP97952 Gm45632-201ENSMUST00000211532 1888 ntBASIC5.68□□□□□ -1.5
Scn1bP97952 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Scn1bP97952 AC156031.1-201ENSMUST00000217288 2555 ntBASIC5.68□□□□□ -1.5
Scn1bP97952 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC5.68□□□□□ -1.5
Scn1bP97952 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Scn1bP97952 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Scn1bP97952 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Scn1bP97952 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Scn1bP97952 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Scn1bP97952 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Scn1bP97952 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Scn1bP97952 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
Scn1bP97952 Gm26419-201ENSMUST00000104272 133 ntBASIC5.68□□□□□ -1.5
Scn1bP97952 Gm24519-201ENSMUST00000104507 132 ntBASIC5.68□□□□□ -1.5
Scn1bP97952 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC5.68□□□□□ -1.5
Scn1bP97952 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Scn1bP97952 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC5.68□□□□□ -1.5
Scn1bP97952 Gm10157-201ENSMUST00000139408 343 ntBASIC5.68□□□□□ -1.5
Scn1bP97952 Gm26355-201ENSMUST00000158220 105 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms