Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Nkx3-1P97436 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Nkx3-1P97436 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Nkx3-1P97436 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
Nkx3-1P97436 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Nkx3-1P97436 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC5.43□□□□□ -1.54
Nkx3-1P97436 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Nkx3-1P97436 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
Nkx3-1P97436 Gm8872-201ENSMUST00000197475 1341 ntBASIC5.43□□□□□ -1.54
Nkx3-1P97436 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Nkx3-1P97436 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Nkx3-1P97436 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC5.43□□□□□ -1.54
Nkx3-1P97436 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Nkx3-1P97436 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Nkx3-1P97436 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Nkx3-1P97436 AC022682.2-202ENSMUST00000224394 3943 ntBASIC5.42□□□□□ -1.54
Nkx3-1P97436 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC5.42□□□□□ -1.54
Nkx3-1P97436 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Nkx3-1P97436 AC124183.1-201ENSMUST00000222367 2135 ntBASIC5.42□□□□□ -1.54
Nkx3-1P97436 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Nkx3-1P97436 Robo2-210ENSMUST00000226478 8059 ntBASIC5.42□□□□□ -1.54
Nkx3-1P97436 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Nkx3-1P97436 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Nkx3-1P97436 Gm45457-201ENSMUST00000209931 3089 ntBASIC5.42□□□□□ -1.54
Nkx3-1P97436 AC154406.1-201ENSMUST00000215220 2529 ntBASIC5.42□□□□□ -1.54
Nkx3-1P97436 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Nkx3-1P97436 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Nkx3-1P97436 AL450321.1-201ENSMUST00000220600 3550 ntBASIC5.42□□□□□ -1.54
Nkx3-1P97436 Mir700-201ENSMUST00000102169 79 ntBASIC5.42□□□□□ -1.54
Nkx3-1P97436 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Nkx3-1P97436 Gm14900-201ENSMUST00000120304 733 ntBASIC5.42□□□□□ -1.54
Nkx3-1P97436 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC5.42□□□□□ -1.54
Nkx3-1P97436 Gm11848-201ENSMUST00000121207 973 ntBASIC5.42□□□□□ -1.54
Nkx3-1P97436 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC5.42□□□□□ -1.54
Nkx3-1P97436 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC5.42□□□□□ -1.54
Nkx3-1P97436 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC5.42□□□□□ -1.54
Nkx3-1P97436 Gm22599-201ENSMUST00000157597 132 ntBASIC5.42□□□□□ -1.54
Nkx3-1P97436 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Nkx3-1P97436 Gm17044-201ENSMUST00000168549 828 ntBASIC5.42□□□□□ -1.54
Nkx3-1P97436 Gm20401-201ENSMUST00000173717 212 ntBASIC5.42□□□□□ -1.54
Nkx3-1P97436 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC5.42□□□□□ -1.54
Nkx3-1P97436 Mir6952-201ENSMUST00000185092 61 ntBASIC5.42□□□□□ -1.54
Nkx3-1P97436 Gm8506-201ENSMUST00000186661 829 ntBASIC5.42□□□□□ -1.54
Nkx3-1P97436 Gm6631-201ENSMUST00000193699 559 ntBASIC5.42□□□□□ -1.54
Nkx3-1P97436 Ighv1-27-201ENSMUST00000194473 340 ntBASIC5.42□□□□□ -1.54
Nkx3-1P97436 Ighv1-44-201ENSMUST00000195597 352 ntBASIC5.42□□□□□ -1.54
Nkx3-1P97436 Gm8454-201ENSMUST00000196980 811 ntBASIC5.42□□□□□ -1.54
Nkx3-1P97436 Gm42886-201ENSMUST00000199214 466 ntBASIC5.42□□□□□ -1.54
Nkx3-1P97436 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC5.42□□□□□ -1.54
Nkx3-1P97436 Gm19653-201ENSMUST00000204326 1039 ntBASIC5.42□□□□□ -1.54
Nkx3-1P97436 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC5.42□□□□□ -1.54
Nkx3-1P97436 Gm45514-201ENSMUST00000211531 689 ntBASIC5.42□□□□□ -1.54
Nkx3-1P97436 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC5.42□□□□□ -1.54
Nkx3-1P97436 Gm7802-201ENSMUST00000216464 262 ntBASIC5.42□□□□□ -1.54
Nkx3-1P97436 Gm4510-201ENSMUST00000218265 427 ntBASIC5.42□□□□□ -1.54
Nkx3-1P97436 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC5.42□□□□□ -1.54
Nkx3-1P97436 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Nkx3-1P97436 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Nkx3-1P97436 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Nkx3-1P97436 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Nkx3-1P97436 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Nkx3-1P97436 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Nkx3-1P97436 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Nkx3-1P97436 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Nkx3-1P97436 AC159006.2-201ENSMUST00000228734 4144 ntBASIC5.42□□□□□ -1.54
Nkx3-1P97436 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Nkx3-1P97436 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Nkx3-1P97436 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC5.42□□□□□ -1.54
Nkx3-1P97436 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Nkx3-1P97436 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Nkx3-1P97436 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Nkx3-1P97436 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
Nkx3-1P97436 Gm42874-201ENSMUST00000198888 1774 ntBASIC5.42□□□□□ -1.54
Nkx3-1P97436 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Nkx3-1P97436 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Nkx3-1P97436 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Nkx3-1P97436 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Nkx3-1P97436 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
Nkx3-1P97436 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Nkx3-1P97436 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Nkx3-1P97436 Ap5m1-208ENSMUST00000228238 3514 ntBASIC5.41□□□□□ -1.54
Nkx3-1P97436 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Nkx3-1P97436 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Nkx3-1P97436 Gm38156-201ENSMUST00000194601 2260 ntBASIC5.41□□□□□ -1.54
Nkx3-1P97436 AC156163.1-201ENSMUST00000215598 3369 ntBASIC5.41□□□□□ -1.54
Nkx3-1P97436 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Nkx3-1P97436 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Nkx3-1P97436 Gm18878-201ENSMUST00000223071 1443 ntBASIC5.41□□□□□ -1.54
Nkx3-1P97436 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Nkx3-1P97436 Gm38322-201ENSMUST00000194074 2300 ntBASIC5.41□□□□□ -1.54
Nkx3-1P97436 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC5.41□□□□□ -1.54
Nkx3-1P97436 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Nkx3-1P97436 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Nkx3-1P97436 Gm19368-201ENSMUST00000221258 4424 ntBASIC5.41□□□□□ -1.54
Nkx3-1P97436 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC5.41□□□□□ -1.54
Nkx3-1P97436 Gm12937-201ENSMUST00000118333 448 ntBASIC5.41□□□□□ -1.54
Nkx3-1P97436 Gm15332-201ENSMUST00000118386 357 ntBASIC5.41□□□□□ -1.54
Nkx3-1P97436 Gm13207-201ENSMUST00000119862 773 ntBASIC5.41□□□□□ -1.54
Nkx3-1P97436 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC5.41□□□□□ -1.54
Nkx3-1P97436 n-R5s19-201ENSMUST00000122793 120 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 148.4 ms